Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00938 ATGATCAGTGGAAACAAAAGCAAGGGGCAAGTAGCAACAGGACTAATGAGGGGAAAGGAGAAAGACGATGACACGACTGAAGATGGGAGGAGGAAGGTAGTTACAAGATTAGTGAGGGAAGGGGAAGACAATGACGATATAAGCAACCAAATGGTGTCCAAGCACACCAACCTTGCCAATGACTTGCTCCAAAAACGCAGCAGATTCTATGCAACTATGGTTGGTGGAAGAAGGCTAGAGGGAAAAGTGGCACTCATAACAGGCTCAGCAAGTGGACTTGGCAAGGCCACGGCCCATCACTTTGTCCACCATGGGGCCCAAGTCATCATTGCTGACAATGACACCATTCTTGGGCCACAAGTTGCTAAAGAGTTGGGCCCATCAGCCCGTTATGTGGAATGTGATGTTGCTGTGGAGGCCCAAGTTGCAGAAGCTGTGAATGTTGCCATGGCCCACTATGGCAAGCTGGACATCATGTACAACAATGCTGGCATCACAGGCCCATCAATTCCTCCAAGCATAGCAGATCTAGACCTTGATGAGTTTGACAAAGTCATGAGGATCAACATAAGGGGAATGATTGCTGGTATAAAGCATGCAGCCCGGGTCATGATACCCATGGGCTCAGGCTCCATTCTATGCACATCAAGCATAAGTGGGGTAATGGGTGGGCTTGGGCCTCATCCTTATACCATATCCAAGTTTGCAATACCTGGGGTAGTCAAATCTGTGGCTAGTGAGTTATGCAAAGTTGGGGTCAGGATCAATTGCATATCCCCAGCTCCAATTCCTACACCAATGGTTTTGGCTGAAATACAAAAGTTTTATCCTGGTTTAACCCAAGAACAGTTAGAGGGTATTGTGACTGGGTTTGTTGGGCTCAAAGGTGCTAAGTGTGAGGACATTGATGTGGCAAGGGCTGCATTGTACTTGGCATCAGATGAAGCAAAGTTTATCTCAGGTCACAATCTCATAGTTGATGGAGGCTTCACCAGCTTTAAAAGTCTCTCATTCCCTTCTCCTCATCAAACTGATTAA 1038 0.4692 MISGNKSKGQVATGLMRGKEKDDDTTEDGRRKVVTRLVREGEDNDDISNQMVSKHTNLANDLLQKRSRFYATMVGGRRLEGKVALITGSASGLGKATAHHFVHHGAQVIIADNDTILGPQVAKELGPSARYVECDVAVEAQVAEAVNVAMAHYGKLDIMYNNAGITGPSIPPSIADLDLDEFDKVMRINIRGMIAGIKHAARVMIPMGSGSILCTSSISGVMGGLGPHPYTISKFAIPGVVKSVASELCKVGVRINCISPAPIPTPMVLAEIQKFYPGLTQEQLEGIVTGFVGLKGAKCEDIDVARAALYLASDEAKFISGHNLIVDGGFTSFKSLSFPSPHQTD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00938 345 MobiDBLite consensus disorder prediction 15 30 - -
Phco2g00938 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 210 218 IPR002347 -
Phco2g00938 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 165 IPR002347 -
Phco2g00938 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 230 249 IPR002347 -
Phco2g00938 345 Pfam Enoyl-(Acyl carrier protein) reductase 88 331 - -
Phco2g00938 345 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 77 334 - -
Phco2g00938 345 FunFam Short-chain dehydrogenase reductase 70 335 - -
Phco2g00938 345 Gene3D - 72 338 - -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 83 100 IPR002347 -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 251 268 IPR002347 -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 154 165 IPR002347 -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 230 249 IPR002347 -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 294 314 IPR002347 -
Phco2g00938 345 PRINTS Glucose/ribitol dehydrogenase family signature 204 220 IPR002347 -
Phco2g00938 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 331 IPR036291 -
Phco2g00938 345 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00938 Phco-Chr2 11793163 11799031 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00938 2 11793163 11799031 Phco2g00938 2 11793163 11799031 ECH