Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00932 ATGTCCATCTTGCCCTCACAAACCCAAGCGTCATCTTCCTCCTCTTCCTCTGCGCCATCTCCTAACCCTAATCCCCAACATGGCACCGGAATCCCTCTTCCTCAACAACCCTTCCCTCATCTCTCACCCCCACTCCACCACGCTCTCGGATCTCTCCAGATCTCCGATATCCCAGGTTCATCGACTCAAGCTGCTGAAGATTCTGGTGGATCTTCCGAAAAGGTGACAGAATTAGGGTCTCCAAGTGGAGTGATGGTTTCACCTCAGCAAAACGCTAGAACATGTTCTAGGATTCCCGGAGGAAGACGGGCAGGAATGGTTTCTTCTCATAGAAACCAACACGCTCCTGGGTCCGTGAGTTCTCATGGAAGTACCCCTATGGCAGGGAGAAAAGCTCAGACTGTGAACGGAAATTACTTGCTGAATTTTCAATATGACCCAATATCCCGTTCTCAACCACGGGGTCCCCCTCCTCCCCCTGCAGCAAGAAGGAATTGGAAGAGGAAGCCATACAATAAAGACTTGTTTTTGCAGGCAAATTACAAGTTCATGGTGTTAGATTCAGGAAATTATTCTCCTGAGTCAATGGATCCTGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACATATTTGACCCCCTTTTCAGTTCAGTGTCCAATTTGTTTGGAGTATCCACTGTGTCCGCAGATAACCTCATGTGGACATATTTTCTGTTTCCCATGTATTCTACAGTACTTAATGATGGGTGAAGAGGATCACAAAGGTGATATCTGGAAAAGGTGTCCTTTGTGCTTTGTGATGACTTCTGCCAAGGATTTATATACAGTTCACATCACAAATGTTAAACAATATCAAGTAGGAGATAATGTTGAGTTCACCTTTTTAACTCGGAAAAAGGATTCATTTACTCCGTCAAATAAACAAGAGACAAATATCACATCATGTGGTAATGGACATTTCTGTAATCCCTTTTCTAAGTTTACTCTTACATCAGATGTAGATCTCTCAGTGAGGCTTTCAATATCAGATCTAGATGGTTGGCTGGCCAGAGCAGATTCTGGTCTTGTTGATGACCTGGAGAAGCTTCCTTTTGTTTGTGCTGCAATGCAGCAACTGGAACAGAGGAAGAGGTATTGGAATGAGCAAAAGTGTAATGACAGCGAAAATTCTAAGCCTATTGATCATGGACATCAGATACCATCCATGGGTACAAATTCTATGGATACTGATGATGAAAACTGTTCTAATGGGTCAAGAACTTCCTCTACTGATTTCCGTGACCAAATTAAGGTTACGATGCTGGATAAGTCAACTGCTGGAGCCTGTTCAGACCAAACTTTGAATGTGGAGAAAGAATTAATAGAGCAACAAATGAATTTATGTTCTTCATATGAGGAGAAGAAGAATACTATTCAAAGGCCTGCAGAGGATGGTGAGGTTGAAGAAGTGAAGGGAAATGATTCATACAGTTTCTACCAGGCTGCTGATGGTCAGCATCTAATTCTTCATCCTCTGAACATGAAGTGTTTGCTCCACCATTATGGGAGCTATGATATGCTTCCACACAGAATAAATGGAAGGATTCTACAATTGGAGACAGTTACTCAGTCTGAGGCCATGAGGAGGCGATATCGATTCCTTAGTCATTTTCCATTAACCACAACATTTCAGCTTTGTGAAGTTGATTTGAGTGTGTTATTACCTCCTGAAGCACTGGCTCCATTTATGGATGAAATAAAGAAACGTGCAAATCAGAGGAAGCAACTTGCAAAAAAGGAACGGAAGGAAAAAATAAGGGCTGAAGCTACAGATACTTATTCCCTTCCTATATCATTAAGTAGTCGGTTTACATCTCATGATGATCCTCCAACATTCTCCATGGATGACTTTGAAGCTCTAGGAAATTCAACTGTATCCTCAAGTACTCCCGTAGCTGGGGAGAAAAAATCGTTCTCAAATGTCACAAGACTTGGGTTTGCTGCTGCTCATGATTCTCCATCCTTGCAAATTCAAGAAACTAGTGGTCTACACAATAACAATACTTCAACTGATTCCTCTGCCACAACAGGTTCGAGAAACGGGGAGACACAGTCATACTCCAATGTTACATCAAGAGCAGAATCAAACATAAGCTCGAATGCACCTAAGACTAATGAGTTGGGGAAGAAAGGTAAGAAGCCTAGTCGAGTTCTTCTGTCCACAGCTGGAGGTAGACGTTATTGA 2229 0.424 MSILPSQTQASSSSSSSAPSPNPNPQHGTGIPLPQQPFPHLSPPLHHALGSLQISDIPGSSTQAAEDSGGSSEKVTELGSPSGVMVSPQQNARTCSRIPGGRRAGMVSSHRNQHAPGSVSSHGSTPMAGRKAQTVNGNYLLNFQYDPISRSQPRGPPPPPAARRNWKRKPYNKDLFLQANYKFMVLDSGNYSPESMDPDKMLQWEDIICVTYLTPFSVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDIWKRCPLCFVMTSAKDLYTVHITNVKQYQVGDNVEFTFLTRKKDSFTPSNKQETNITSCGNGHFCNPFSKFTLTSDVDLSVRLSISDLDGWLARADSGLVDDLEKLPFVCAAMQQLEQRKRYWNEQKCNDSENSKPIDHGHQIPSMGTNSMDTDDENCSNGSRTSSTDFRDQIKVTMLDKSTAGACSDQTLNVEKELIEQQMNLCSSYEEKKNTIQRPAEDGEVEEVKGNDSYSFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRINGRILQLETVTQSEAMRRRYRFLSHFPLTTTFQLCEVDLSVLLPPEALAPFMDEIKKRANQRKQLAKKERKEKIRAEATDTYSLPISLSSRFTSHDDPPTFSMDDFEALGNSTVSSSTPVAGEKKSFSNVTRLGFAAAHDSPSLQIQETSGLHNNNTSTDSSATTGSRNGETQSYSNVTSRAESNISSNAPKTNELGKKGKKPSRVLLSTAGGRRY 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00932 742 Coils Coil 578 602 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 25 41 - -
Phco2g00932 742 FunFam RING finger protein 10 213 281 - -
Phco2g00932 742 SMART ring_2 220 266 IPR001841 -
Phco2g00932 742 MobiDBLite consensus disorder prediction 674 720 - -
Phco2g00932 742 SUPERFAMILY RING/U-box 219 270 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 674 742 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 385 424 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 1 24 - -
Phco2g00932 742 CDD RING-HC_RNF10 218 275 - -
Phco2g00932 742 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 213 299 IPR013083 -
Phco2g00932 742 MobiDBLite consensus disorder prediction 146 166 - -
Phco2g00932 742 ProSitePatterns Zinc finger RING-type signature. 235 244 IPR017907 -
Phco2g00932 742 ProSiteProfiles Zinc finger RING-type profile. 220 266 IPR001841 -
Phco2g00932 742 MobiDBLite consensus disorder prediction 1 129 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 54 96 - -
Phco2g00932 742 MobiDBLite consensus disorder prediction 401 424 - -
Phco2g00932 742 PANTHER RING FINGER 10 FAMILY MEMBER 63 742 IPR039739 -
Phco2g00932 742 MobiDBLite consensus disorder prediction 111 129 - -
Phco2g00932 742 Pfam Zinc finger, C3HC4 type (RING finger) 220 266 IPR018957 GO:0046872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00932 2 11708152 11718500 Phco2g00932 2 11708152 11718500 ECH