Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00930 ATGTTTTTTCCAACTCCTGGATTTTTCTCACCATCTGAGAATTGCAATGACAACTTCTTTCCATTAGTGGGTGATCACCATACACCTCACCAACATTATCTCACAGGAGTCGAAACACTCAAGTTGGTCTTCATGTTAATGTGCCAGAAAGAAATATTGGAATCCATCGCAATGGTAGACACATGGTTAACTCGGGTGAATGAACCTTCTTTGCTCCTTATTAGCAAGCCTGAATATAGAGCCAAAATCAGTGCAAAATCGGTAGCAGCAACGATGGTCAATGCGGCAGTGGTATTCGCCGTTTTGGTGGCGGCGATTTGGGTTGCGGAATCAGAGTACATAGAGTACAATACGACGCAGAGGATAGTACCAGACAAAATAAACGTGCACTTGGTACCTCACTCCCACGACGATGTTGGCTGGCTCAAGACCGTCGATCAGTACTACGTTGGAGCCAATAACTCCATTCGGGGTGCTTGTGTGCAGAACGTGCTGGATTCTGTGATATCCTCGCTCTTGGAGGACAAGAATCGCAAGTTCATATATGTTGAGATGGCTTTTTTCCAAAGATGGTGGAGACAGCAAAGTAAAGCAATGAAAATTAAGGTCAAGGAGCTTGTCAACTCGGGTCAGTTGGAATTCATAAATGGGGGTATGTGTATGCATGATGAGGCCACTCCACATTACATTGATCTAATTGACCAGACCACGCTGGGGCATCAATTTATCAAAGAGGAATTTGGTAAGGTTCCAAGAGTTGGTTGGCAGATTGACCCATTTGGCCATTCTGCAGTTCAGGCTTACTTGCTTGGTGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATTGATTACCAAGATCGAGCCAAGCGATTGAAGGAGAAGACTCTTGAGGTTATTTGGCAGGGTTGCAAGTCTCTTGGCTCTTCTTCACAGATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTTACGTTTGAGATAAATGATGTTTCACCTCCTATTCAGGATGACATTCTACTATTTGACTATAATGTTCAAGAAAGGGTCAACGATTTTGTATATGCCGCCTTAGCTCAGGCTAATGTGACCAAAACAAATCACATGATGTGGACAATGGGTACAGATTTCCGTTATCAATATGCTAATTCATGGTTTAGACAGATGGATAAGTTCATTCACTATGTTAATCAGGATGGACGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAATATTGGCCTCTTAAAGTTGGTGATTTCTTCCCGTACGCAGATCACCCAAATGCATATTGGACTGGATATTTTACAAGTAGGCCAGGTCTGAAGGGCTATGTGAGAGTGATGAGTTCTTACTATCAGGCTGCAAGGCAATTGGAATATTTTAAAGGGAGGAATGAAACAGGACCAAATACTGATGCATTAGCTGATGCTTTAGCAATTGCTCAGCACCATGATGCAGTTAGTGGCACAGAAAGACAACATGTTGCATCTGATTATGCATTGCGTCTCTCATTGGGATATGAAGAGGCAGAAAGGTTGGTTGCATCTGCACTTGCTTCCTTGGTAAATCAAAGATTAAGTTCCCATAGGATGAACCCAGTGACAGAATTCCAACAGTGTCCTCTTCTTAATATAAGTTACTGTCCTCCATCAGAAACTATGTTGGTTAATGGAAAAAGCTTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAAGAGGGAAGATGTAATTCGAATTCCTGTTTCCACTACAAATGTTTTTGTTCAGGATTTGGATGGGAAGAAAATTGAGTCTCAGCTTCTGCCTCTATCTAATGCTACTTTGACTATGAGAAAACATTATGTCAGAGCATATACAGGAAAAGCTCCTGGGAGCAACGTACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACCTATACAGTCAGAAGCTCTGATCAATCAAATGATAGTTCAACTATCTCAAAGATGTCAAGTCCAGAAGGAGGTATTGATAAAAGCATAAAAGTTGGACAAGGGAATCTAATGCTACTTTATTCAGCAGATGAGGGAGAACTGACTCACTATGTTAACAGTAGAACCCTGGTTACAGCATCAGTTGAACAATCATACAGTTATTATTCTGGAAACGATGGGACTGATAAAGATCCCCAGGCTTCAGGGGCATATGTCTTCCGTCCAAATGGTTCGTTTCCCATTAAATCAGATCATCAGGTATCTTTTTCTGTCCTGCGTGGTCCAATATTGGATGAAGTGCATCAACAGCTCAATCCATGGGTATCCCAGATTACACGGGTATTCAAGGCAAAAGAACATGCTGAAATTGAGTTCACAGTTGGGCCTATACCAGTGGATGATGGCATTGGGAAAGAAGTTATTACTCAATTTAAAACGACAATGAAGAGCAACAAGACATTCTACACCGATTCTAGTGGTCGTGACTTCATTAAGAGGATTCGAGATTTCAGGACAGATTGGGATCTACGAGTGAACCAACCCATAGCTGGAAACTATTACCCTGTTAATTTAGGAATATATATTCAAGATAGTAGTGTGGAATTCTCAGTGTTGGTGGACCGCTCAGTTGGAGGTTCCAGCTTGGAGGATGGCCAAATGGAGCTAATGCTCCATAGGAGGTTGCTTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCATTGCTGATAAGTGTGAGGGCTTAACGATTCAAGGAAAACTTTACCTTAGAATTGACCATAAAGGTGAAGGTGCCAAGTGGCGTCGCACAGTTGGCCAGGAGTTATATTCACCACTGATGTTGGCCTTCACAGAACAGGATGGGGATAATTGGTCACATTTCGCTGCATCAACATTTTCAGGCACAGATTCTTCCTACAGTTTACCAAACAACATTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCGTGAGATTGGCTCATCTTTATGAGATTGGAGAGGACAATAATTACTCAGTAATGGCTAGTGTGGAATTGAAAAAGTTGTTTCCTGACAAGAAGATAAATAAAGTGACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGTTGAAATGGAAAAGAGGAAGTTAGATTGGAAGGTAGAAGGTTCCACTGATGAACCTAAGGTGGTGAGGGGAGGACCTGTTGATCCTACAAACTTGGTGGTTGAACTAGCTCCAATGGAGATCCGGACATTCTTCATTGACTTTAATCCCCTTCAAACAGTTTCTGAAGCAGAAAATCATATGGCAAATTATCAAAGCATCCAATAA 3357 0.4153 MFFPTPGFFSPSENCNDNFFPLVGDHHTPHQHYLTGVETLKLVFMLMCQKEILESIAMVDTWLTRVNEPSLLLISKPEYRAKISAKSVAATMVNAAVVFAVLVAAIWVAESEYIEYNTTQRIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISSLLEDKNRKFIYVEMAFFQRWWRQQSKAMKIKVKELVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKEEFGKVPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVIWQGCKSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDILLFDYNVQERVNDFVYAALAQANVTKTNHMMWTMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEYWPLKVGDFFPYADHPNAYWTGYFTSRPGLKGYVRVMSSYYQAARQLEYFKGRNETGPNTDALADALAIAQHHDAVSGTERQHVASDYALRLSLGYEEAERLVASALASLVNQRLSSHRMNPVTEFQQCPLLNISYCPPSETMLVNGKSLVIVVYNPLAWKREDVIRIPVSTTNVFVQDLDGKKIESQLLPLSNATLTMRKHYVRAYTGKAPGSNVLKYWLAFPVSVPPLGFSTYTVRSSDQSNDSSTISKMSSPEGGIDKSIKVGQGNLMLLYSADEGELTHYVNSRTLVTASVEQSYSYYSGNDGTDKDPQASGAYVFRPNGSFPIKSDHQVSFSVLRGPILDEVHQQLNPWVSQITRVFKAKEHAEIEFTVGPIPVDDGIGKEVITQFKTTMKSNKTFYTDSSGRDFIKRIRDFRTDWDLRVNQPIAGNYYPVNLGIYIQDSSVEFSVLVDRSVGGSSLEDGQMELMLHRRLLHDDARGVGEVLNETVCIADKCEGLTIQGKLYLRIDHKGEGAKWRRTVGQELYSPLMLAFTEQDGDNWSHFAASTFSGTDSSYSLPNNIALLTLQEFKNGKVLVRLAHLYEIGEDNNYSVMASVELKKLFPDKKINKVTEMSLSANQERVEMEKRKLDWKVEGSTDEPKVVRGGPVDPTNLVVELAPMEIRTFFIDFNPLQTVSEAENHMANYQSIQ 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00930 1118 Gene3D Glycoside hydrolase 38, N terminal domain 127 407 IPR027291 -
Phco2g00930 1118 Pfam Glycosyl hydrolases family 38 C-terminal domain 693 907 IPR011682 GO:0004559|GO:0006013
Phco2g00930 1118 FunFam Alpha-mannosidase 690 955 - -
Phco2g00930 1118 FunFam Alpha-mannosidase 975 1100 - -
Phco2g00930 1118 Pfam Glycosyl hydrolases family 38 N-terminal domain 128 439 IPR000602 GO:0004559|GO:0006013
Phco2g00930 1118 Gene3D - 688 955 - -
Phco2g00930 1118 SUPERFAMILY Galactose mutarotase-like 543 1098 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco2g00930 1118 SUPERFAMILY Families 57/38 glycoside transferase middle domain 443 538 IPR028995 -
Phco2g00930 1118 Gene3D - 562 685 IPR013780 -
Phco2g00930 1118 SMART Alpha_mann_mid_2 444 518 IPR015341 GO:0004559|GO:0006013
Phco2g00930 1118 Pfam Alpha mannosidase middle domain 444 536 IPR015341 GO:0004559|GO:0006013
Phco2g00930 1118 FunFam Alpha-mannosidase 127 407 - -
Phco2g00930 1118 FunFam Alpha-mannosidase 564 690 - -
Phco2g00930 1118 SUPERFAMILY Glycoside hydrolase/deacetylase 116 442 IPR011330 GO:0005975
Phco2g00930 1118 FunFam Alpha-mannosidase 406 486 - -
Phco2g00930 1118 Gene3D Glycoside hydrolase family 38, central domain 487 542 IPR037094 GO:0004559|GO:0006013
Phco2g00930 1118 Gene3D Glycoside hydrolase family 38, central domain 408 486 IPR037094 GO:0004559|GO:0006013
Phco2g00930 1118 PANTHER ALPHA-MANNOSIDASE 98 1099 - -
Phco2g00930 1118 CDD GH38N_AMII_LAM_like 127 403 - -
Phco2g00930 1118 FunFam Alpha-mannosidase 487 542 - -
Phco2g00930 1118 Gene3D - 975 1100 - -
Phco2g00930 1118 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 989 1095 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00930 Phco-Chr2 11598345 11638345 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00930 2 11598345 11638345 Phco2g00930 2 11598345 11638345 ECH