Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00904 ATGGTTCTTCAAAATGATATTGATTTGCTAAATCCTCCTGCTGAGATTGAGAAGAGGAAACACAAACTCAAGCGTCTTGTTCAGTCCCCAAACTCTTTCTTCATGGATGTTAAGTGCCAGGGTTGCTTTAACATAACGACTGTGTTTAGCCACTCTCAGACTGTTGTTGTATGTGGGAACTGCCAGACTGTCTTGTGCCAGCCAACCGGGGGACGGGCAAGGCTAACTGAGGGATGCTCCTTTAGGAAGAAGGGAGACTGA 261 0.4636 MVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00904 86 Gene3D - 5 85 IPR023407 -
Phco2g00904 86 FunFam 40S ribosomal protein S27 1 86 - -
Phco2g00904 86 Hamap 30S ribosomal protein S27e [rps27e]. 24 84 IPR000592 GO:0003735|GO:0005840|GO:0006412
Phco2g00904 86 PANTHER 40S RIBOSOMAL PROTEIN S27 1 86 IPR000592 GO:0003735|GO:0005840|GO:0006412
Phco2g00904 86 ProSitePatterns Ribosomal protein S27e signature. 38 70 IPR000592 GO:0003735|GO:0005840|GO:0006412
Phco2g00904 86 Pfam Ribosomal protein S27 30 84 IPR000592 GO:0003735|GO:0005840|GO:0006412
Phco2g00904 86 SUPERFAMILY Zn-binding ribosomal proteins 30 84 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00904 Phco-Chr2 11053945 11054853 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00904 2 11053945 11054853 Phco2g00904 2 11053945 11054853 ECH
Phco2g00904 2 11053945 11054853 Phco5g01293 5 47684569 47685341 PCT