Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00902 ATGGACTATTGCTTGAGAGAGCTAGAGGGGAAGCAAGCACATGACCCTTTATTGATTGAGAAAATGAATAATTCATCACAAAGTAGTAGTAGTGAGAGATGTGTGTGGGTGCCAGGGCCAGTGATTGTGGGAGCAGGGCCTTCAGGGCTTGCAACAGCAGCATACCTGAAAGAGAAAGGAGTTCCAAGCCTAATCCTGGAGAGATCCAACTGCATAGCATCTTTGTGGCAACTCAAGACCTATGACAGGCTTCACCTCCACTTGCCAAAGCAGTTTTGTGAACTCCCCTTGATGGGGTTCCCTTGTGAGTTCCCCACATACCCCACAAAACAACAGTTCATAGAGTACTTGGAGAGCTATGCTGAGAGGTTTGCCATTAGGCCACGGTTCAATGAGACCGTTAGGCATGCTGAGTTTGATGCCACTCTTGGGTTATGGAAGGTGAGGAGTTTTAACAAGAGGGAGGTGGCAACAGAGTTTGTGTGTAGGTGGCTGATTGTGGCCACCGGGGAGAATGCAGAGGCAGTGGTGCCTCAGATTGAGGGAATGGGGGAGTTTGGTGGGACCATAAAGCACACAAGTCTGTACAAGAGTGGGGCAGAGTTTAGAGGGAAGAGAGTGTTGGTGGTTGGGTGTGGGAATTCAGGGATGGAAGTGTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTCAGAGATACAGTACATATCTTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGCTCAAGTGGCTTCCAATTGAGTTTGTGGATCGGTTTCTTCTCATAGTGTCATGGCTCATGCTTGGTGACACGGCTCGGTTCGGATTGGACCGGCCAAAACTGGGTCCCCTTCAACTCAAAAACCTCTCCGGAAAGACACCAGTGCTTGATGTGGGTACCCTTGCCAAGATCAAAAGTGGACATATAAAGGTACGACCATCCATCGAGCGGTTAAAACGTTATACAGTTGAATTTGTTGATGGAAGGACAGAGATTTTTGATGCCATCATTTTGGCAACTGGTTACAAAACTAATGTGCCCTATTGGCTAAAGGAAGGGGATATGTTCTCTAAGGAAGATGGGTTCCCTACGAAGCCATTTCCAAATGGATGGAAGGGTGAGAATGGACTGTATGCAGTTGGTTTCACCAAACGTGGCCTTCTTGGTACATCAATGGATGCCAAGAGAATAGCTGAGCACATCGAAAGATGTTGGAACCACTTTTTCCCACTCACTTAA 1269 0.4728 MDYCLRELEGKQAHDPLLIEKMNNSSQSSSSERCVWVPGPVIVGAGPSGLATAAYLKEKGVPSLILERSNCIASLWQLKTYDRLHLHLPKQFCELPLMGFPCEFPTYPTKQQFIEYLESYAERFAIRPRFNETVRHAEFDATLGLWKVRSFNKREVATEFVCRWLIVATGENAEAVVPQIEGMGEFGGTIKHTSLYKSGAEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIEFVDRFLLIVSWLMLGDTARFGLDRPKLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPSIERLKRYTVEFVDGRTEIFDAIILATGYKTNVPYWLKEGDMFSKEDGFPTKPFPNGWKGENGLYAVGFTKRGLLGTSMDAKRIAEHIERCWNHFFPLT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00902 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Phco2g00902 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 344 366 - -
Phco2g00902 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Phco2g00902 422 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Phco2g00902 422 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
Phco2g00902 422 SUPERFAMILY FAD/NAD(P)-binding domain 41 312 IPR036188 -
Phco2g00902 422 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 41 416 - -
Phco2g00902 422 SUPERFAMILY FAD/NAD(P)-binding domain 204 413 IPR036188 -
Phco2g00902 422 Gene3D - 40 417 IPR036188 -
Phco2g00902 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Phco2g00902 422 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Phco2g00902 422 FunFam Flavin-containing monooxygenase 40 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00902 Phco-Chr2 11011300 11016104 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00902 2 11011300 11016104 Phco2g00902 2 11011300 11016104 ECH