Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00900 ATGGGTTGTGGAGGGGACTTGATCCATGAGAAAGTTAGGGCTTTATGGGCAGTGAGAAAGAACTGCAGAAGAATGCCTCACCGTTCCTGTTTCTGCAAGCATGCACATTCAAATTCAAATCCTCTTCTCCTCAAATTGCTTCAGGTTCCCACCTCACACATCAAAACGACGCTGGATCAGGAAATGCCTTCTCTTCAAAGCTCACACCCTTCCTGGGACTTCCTTGTTACCTCTCTCTTCCCTTCTTCTTCAGACAAAGCTCGATTGGTATTGGAATGGATTTTGGAGAAGATGCTGAAAGAAAATGCGAAAGACTGTGATATTTTCTCCAAACTCATCTTTCTATGTGGAAAGGTGAAAGACGTACTGCTAGGAATGCGTGTGTTTAGTTCTATGGAGGCTATTGGAGTTAAACCCAATTCCATGGTTTTCAATTCCCTTATAAGTGTCTGTTTGTCTTCCTATAATGTTGTCACAGCACTTAGTTTATTTGAGATCATGGAGAGTTCAGAGAGCTATAAACCTGATTCTCATACTTATAATATGTTTATTTCAGCATTTTCCAAGTCAGGGAATGTTGATGCCATGTTAGCTTGGTACTCGGCAAAGAAGGCTGCTGCTGGATTTGGTCCTGATCTTCAAATGTTTGAATCCCTTATATCTGGCTGTGTTAATTCTAGAACATTTGAGATTGCTGATGCAATTTTTGAGGAAATGATGACTTCTGGAATTGTACCCAGTGCATCAATACTGGAGAGTATGCTTAATGGGATTTGCAAGCAGAAGAGATTGGATCGAGCAGAGGAGTTTTTCAAGTTAGCGATTGATTCTGGATGGGAAGTAAACGAGAACATGGCTGATCAGTTAATAGCATTGTATCACCAACAAGGGAAAGTGGAAGAGATGGAGGCGCTATTTGAAACTGTGACAAATCCCTGTGTAATTACTACCAGTGTTCTTGCGCGACTTCATTGTGGGATTGTGAAGATTTATGCTATGTTAGATAGGTTGGATGATGTAGAGTTTGCTGTCGGTAGAATGCTTAAACAGGGGCTGTCATTCACAAGTGCAGATGATGTTGAAAAGGTCATCTGTTCATACTTTAGAAGGGAAGCTTATGATAGACTAGACATATTCTTGGAATGTTTAAAGAGTGACTATGTGCTTAATAAATCAACTTATGACTTGTTAATATCTGGCTATAAACGAGCACACTTGCTTGAAAAAGTAGATAGAGTGATGAAAGACCTGAAATCAGCTGGTTTAGCATGA 1272 0.4025 MGCGGDLIHEKVRALWAVRKNCRRMPHRSCFCKHAHSNSNPLLLKLLQVPTSHIKTTLDQEMPSLQSSHPSWDFLVTSLFPSSSDKARLVLEWILEKMLKENAKDCDIFSKLIFLCGKVKDVLLGMRVFSSMEAIGVKPNSMVFNSLISVCLSSYNVVTALSLFEIMESSESYKPDSHTYNMFISAFSKSGNVDAMLAWYSAKKAAAGFGPDLQMFESLISGCVNSRTFEIADAIFEEMMTSGIVPSASILESMLNGICKQKRLDRAEEFFKLAIDSGWEVNENMADQLIALYHQQGKVEEMEALFETVTNPCVITTSVLARLHCGIVKIYAMLDRLDDVEFAVGRMLKQGLSFTSADDVEKVICSYFRREAYDRLDIFLECLKSDYVLNKSTYDLLISGYKRAHLLEKVDRVMKDLKSAGLA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00900 423 Pfam PPR repeat 253 278 IPR002885 -
Phco2g00900 423 Pfam PPR repeat 392 422 IPR002885 -
Phco2g00900 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
Phco2g00900 423 Pfam PPR repeat family 139 189 IPR002885 -
Phco2g00900 423 NCBIfam pentatricopeptide repeat 178 200 IPR002885 -
Phco2g00900 423 NCBIfam pentatricopeptide repeat 253 283 IPR002885 -
Phco2g00900 423 NCBIfam pentatricopeptide repeat 216 247 IPR002885 -
Phco2g00900 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 211 IPR002885 -
Phco2g00900 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Phco2g00900 423 PANTHER EXPRESSED PROTEIN 21 422 IPR044179 GO:0003729
Phco2g00900 423 Pfam Pentatricopeptide repeat domain 207 248 IPR002885 -
Phco2g00900 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 423 IPR002885 -
Phco2g00900 423 Gene3D Tetratricopeptide repeat domain 82 329 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00900 2 10985364 10989483 Phco2g00900 2 10985364 10989483 ECH