Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00895 ATGCTTCTCCGTTTCTCCCACTTTCTCTGCCACCGTCCTCCTCTGCATGCCATGGCGCGTGCCGTCACGTGCGCAACTCAGCCCCCTCATTTCTCTCCTGCATCCAACAGCGCCATCTCTAGCCGCGTCTCTCTGTTCTTGAAATCCCCGCGTTTTGGCCGCAGTTTTCATGCGCTCACCCGGTTCCGGAGCGAAGGTAGGCACCGCCTCGTGGCAGTAGTTCGCTCCGAAAGGAAGGAGTATCGGAAGGTGAGGCGAAGAGCGTCCAAGAACAACGAGAAAGAGTTGCAACTCCGCGTGCAAATTTGCCTCGAAGAAGATTTGCCCGACGATCCTGAAATCTTGAGCATTGCGGAGTTGCTTCGGCTAAATGTTCCAATGGCGATGAAACTGGCTTTTGATGGTTTGAAAGGTTCTGGTTATAAAACACGAGACACTGCTATAAGTGATGTTGGTGGGTTTGATAGTGTTGAGGTATCGATACTTCTTTGCAATGATGAGTTTATTCGAAAACTTAATAAGGAATGGAGAGATGAAGACCATGCCACAGATGTTCTCTCAATGTCAAGTCATATACCTGAGCTCAAGATTCCTATTCTCATGTTAGGTGATATTGTAATTTCTGTTGAGACAGCTGCAAGACAAGCAGAGGAAAGAGGGCACACTCTTCTTGATGAGATCCGAATCCTCATGGTTCATGGCTTGTTACATCTTTTGGGATTTGATCATGAAATAAGTGAAGAGGCTGAAGTAGAAATGGAGAGAGAGGAGGAAATCCTTTTAAAGAGTCTTGATTGGAAAGGAAAAGGGCTAATAAAAAGTGCATGTGATGCTGAAACAAATTCAAATTTAAGTTTTCACCAAAACAATTCAGATGACAGGAAGAAAGAAGGCAGTCTTAGATTTTACAAACCAAAGTTCAGATATATCTTCTGTGATATGGATGGAACATTGCTGAACAGCAAAAGTCAAATTTCTTCTACAACTGTCAATGCTTTGAGAGAGGCATCTTCAAGAGGGGTGAAAATTGTGATAGCTACTGGAAAAGCTCGTCCAGCTGTGATAGACATTTTTAAAATGGTTGATTTAGCTGGAAAAGATGGCATTGTTTCAGAATTTTCTCCTGGGGTTTTCTTACAGGGATTGCTTGTTTATGGCAGACAAGGTCAGGAAATATTTAGGAGCAACTTAGATCTAAATGTCTGTAGAGAGGCATGTCTTTACTCTTTGGAGAATAAGGTACCACTAATTGCATTTTGTGAAGGGCGTTGCTTAACCCTATTTCATGATCCGCTTGTTGATTCATTGCATACAATATACCATGAACCGAAGGCTGAGGTCATGCCTTCTGTTGAACATCTATTGGCTTCTTCTGAGATACAGAAAATGATTTTCTTAGACACAGCTGAGAAGGTGGCTGGCACCTTGCGGCCATACTGGTCAGATGCAACAAAAGATCGTGCCACTGTTGTTCAAGCTGTGCCTGACATGCTGGAAATTGTACCCTCGGGAACATCAAAAGGGAATGGAGTAAAAGTGCTGCTTGATCATTTGGGGGTTACTGCTAAGGAGATAATGGCTATTGGTGATGGGGAAAATGATATGGAGATGCTTGATCTGGCTTCTCTAGGCATCGCACTTAGTAACGGATCTGAAAAGACCAAAGCTGTGGCTAACGTAATTGGTTTAAGCAATGATGAAGACGGTGTGGCAGATGCCATCTATAGATATGCATTCTGA 1740 0.4356 MLLRFSHFLCHRPPLHAMARAVTCATQPPHFSPASNSAISSRVSLFLKSPRFGRSFHALTRFRSEGRHRLVAVVRSERKEYRKVRRRASKNNEKELQLRVQICLEEDLPDDPEILSIAELLRLNVPMAMKLAFDGLKGSGYKTRDTAISDVGGFDSVEVSILLCNDEFIRKLNKEWRDEDHATDVLSMSSHIPELKIPILMLGDIVISVETAARQAEERGHTLLDEIRILMVHGLLHLLGFDHEISEEAEVEMEREEEILLKSLDWKGKGLIKSACDAETNSNLSFHQNNSDDRKKEGSLRFYKPKFRYIFCDMDGTLLNSKSQISSTTVNALREASSRGVKIVIATGKARPAVIDIFKMVDLAGKDGIVSEFSPGVFLQGLLVYGRQGQEIFRSNLDLNVCREACLYSLENKVPLIAFCEGRCLTLFHDPLVDSLHTIYHEPKAEVMPSVEHLLASSEIQKMIFLDTAEKVAGTLRPYWSDATKDRATVVQAVPDMLEIVPSGTSKGNGVKVLLDHLGVTAKEIMAIGDGENDMEMLDLASLGIALSNGSEKTKAVANVIGLSNDEDGVADAIYRYAF 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00895 579 NCBIfam HAD-IIB family hydrolase 309 546 IPR006379 -
Phco2g00895 579 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 149 268 - -
Phco2g00895 579 ProSitePatterns Hypothetical cof family signature 2. 528 550 - -
Phco2g00895 579 SUPERFAMILY HAD-like 303 577 IPR036412 -
Phco2g00895 579 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 95 579 IPR002036 GO:0004222|GO:0006364
Phco2g00895 579 Gene3D - 310 574 IPR023214 -
Phco2g00895 579 Gene3D Metalloproteases ("zincins"), catalytic domain 136 266 IPR023091 GO:0004222
Phco2g00895 579 ProSitePatterns Uncharacterized protein family UPF0054 signature. 233 243 IPR020549 -
Phco2g00895 579 CDD HAD_Pase 310 576 - -
Phco2g00895 579 SFLD Haloacid Dehalogenase 310 578 - -
Phco2g00895 579 ProSitePatterns Hypothetical cof family signature 1. 309 320 - -
Phco2g00895 579 NCBIfam rRNA maturation RNase YbeY 146 263 IPR002036 GO:0004222|GO:0006364
Phco2g00895 579 NCBIfam Cof-type HAD-IIB family hydrolase 309 574 IPR000150 GO:0016787
Phco2g00895 579 SFLD C2.B: Phosphomannomutase and Phosphatase Like 310 578 - -
Phco2g00895 579 Gene3D - 396 503 - -
Phco2g00895 579 Pfam haloacid dehalogenase-like hydrolase 310 574 - -
Phco2g00895 579 Hamap Endoribonuclease YbeY [ybeY]. 99 273 IPR002036 GO:0004222|GO:0006364
Phco2g00895 579 Pfam Endoribonuclease YbeY 154 263 IPR002036 GO:0004222|GO:0006364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00895 2 10835388 10853559 Phco2g00895 2 10835388 10853559 ECH
Phco7g00955 7 7721665 7722147 Phco2g00895 2 10835388 10853559 ECH