Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00821 ATGTCGTTTCAGGACTCGGACAACACGAAGTCAGAGGCGAGTGCGTTCGACGCGCCGGCGGCGTCGCGGCTCGTGACGGAGTTGCGTGGAACCTTCGCTTCGGGCAAAACTCGCAGTTACGAGTGGCGACTGTCGCAGGTCAAAGCGCTCGCTAAACTCGTCGCCGATCACGAGCAGGAGATCGTCGACGCGCTCCAAAAGGACCTCGCGAAGCCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCGCTCAAAGAATTGAAACATTGGATAACTCCCGAAAAGGTCAAAACTTCACTCGCAAGTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGCTAGTCATCTCGGCATGGAACTACCCTTTTCTGTTGTCACTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATCCTGTGGTTCTAAAACCATCGGAAATTGCTCCAGCCACATCATCACTGTTGGCAAAACTGCTGGGAGACTACATGGATAAGTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACTTCCGCATTGCTACAGCAAAAGTGGGACAAAATTTTCTATACAGGCAATGGACGAGTGGCACGTATTGTGATGGCTGCTGCTGCAAAACACCTAACACCAGTTGTGCTGGAGCTCGGAGGAAAATCTCCGGTTGTTGTTGATTCAAACATCAATTTAAAGGTAGCAACAAGACGAATAATTGCTGGAAAGTGGGGTTGTAATAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGAATATGCTGCCAAGTTGGTGGATGCGTTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGTATCGTGAACTCCAATCACTTTAATCGCTTGAAAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTGAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTGCTTCCCATCCTCATGGTAGACAAACTGGAAGAAAGCTTTGAAGTGATCAATTCAGGACCAAAGCCTCTCGCTGCATATATATTTACAAATAACAAGAAGCTCAAGGAGCTATTTGTTATGAATATTTCAGCTGGCGGCTTGGTTGTTAATGACACCACTTTACATCTTGCGGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGGGCATACCACGGGAAATTCTCATTTGATGCATTTAGCCACAAAAAGGCAGTTCTCTATCGCAGTTTTATTGGTGATGCATCAGTAAGGTACCCACCATACACAACTACAAAGCAAAGATTGCTAAAAGCTCTCATTGGCGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTGGTCCTAG 1482 0.4507 MSFQDSDNTKSEASAFDAPAASRLVTELRGTFASGKTRSYEWRLSQVKALAKLVADHEQEIVDALQKDLAKPPLETVAYEIAMLKNSCKVALKELKHWITPEKVKTSLASFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNPVVLKPSEIAPATSSLLAKLLGDYMDKSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYVITTKEYAAKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLKKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMSEEIFGPLLPILMVDKLEESFEVINSGPKPLAAYIFTNNKKLKELFVMNISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFIGDASVRYPPYTTTKQRLLKALIGGGILGIIRALFGWS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00821 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 226 233 IPR029510 GO:0016491
Phco2g00821 493 SUPERFAMILY ALDH-like 23 463 IPR016161 GO:0016491
Phco2g00821 493 FunFam Aldehyde dehydrogenase 29 233 - -
Phco2g00821 493 PIRSF ALDH 5 483 IPR012394 GO:0006081
Phco2g00821 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 448 IPR016162 GO:0016491
Phco2g00821 493 PANTHER ALDEHYDE DEHYDROGENASE 21 480 IPR012394 GO:0006081
Phco2g00821 493 Pfam Aldehyde dehydrogenase family 17 450 IPR015590 GO:0016491
Phco2g00821 493 FunFam Aldehyde dehydrogenase 230 430 - -
Phco2g00821 493 Coils Coil 47 67 - -
Phco2g00821 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 230 430 IPR016163 GO:0016620
Phco2g00821 493 CDD ALDH_F3FHI 21 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00821 Phco-Chr2 9361337 9369750 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00821 2 9361337 9369750 Phco2g00821 2 9361337 9369750 ECH