Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00794 | ATGTTGAAGACGAAACCATTCCAAGGTGCCCACGTGTTCATGTCGCGAAACCTCGTGCCGCCGGAAGTCTTCGACGCGCTGCACGATGCCGTTAAAGATAACGGCGCTCAGCTCCATCTCTGCTGCGACCCCTCCCGCAACGGCCCCAACGATTACCACATCATTGCTTCCAGAAAACACGAAAAGTTCGATCATCTCAAATCCAAGGGCTGCAAGTTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCCAAAGGTGGAAGGTCTCTGCCTAAACAAGGCTTCACTTGTTGCCTTGCCATGGACGGCGTCAAAATACTTGCATCTGGTTTTGATATGGAAGAGAAGGTTAAGATAGAAGAGTTAGTGGCTGAAATGGGGGGAGTGCTACACACTAAGACATCGTTGGATCTTAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAGTACAAGTGGGCTTTGAATGAATTGAAGAAACCAATAGTCACGTATGAATGGTTAAAACAATGCTCGGAGGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATTGCAGCAGATGTTCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGGTGGAAAATACTCCGCGGAATTGACAAAGAATTGCACACATTTGATTTCTGAGATATCCTTCTCATAG | 705 | 0.4511 | MLKTKPFQGAHVFMSRNLVPPEVFDALHDAVKDNGAQLHLCCDPSRNGPNDYHIIASRKHEKFDHLKSKGCKLLGPRCVLSCAKGGRSLPKQGFTCCLAMDGVKILASGFDMEEKVKIEELVAEMGGVLHTKTSLDLNFVIVKNVLAAKYKWALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIAADVRKEMEKLILQNGGKYSAELTKNCTHLISEISFS | 234 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00794 | 234 | Pfam | twin BRCT domain | 190 | 230 | IPR001357 | - | |
| Phco2g00794 | 234 | Pfam | BRCA1 C Terminus (BRCT) domain | 100 | 170 | IPR001357 | - | |
| Phco2g00794 | 234 | SMART | BRCT_7 | 4 | 86 | IPR001357 | - | |
| Phco2g00794 | 234 | SMART | BRCT_7 | 97 | 174 | IPR001357 | - | |
| Phco2g00794 | 234 | SMART | BRCT_7 | 184 | 234 | IPR001357 | - | |
| Phco2g00794 | 234 | SUPERFAMILY | BRCT domain | 186 | 229 | IPR036420 | - | |
| Phco2g00794 | 234 | SUPERFAMILY | BRCT domain | 58 | 183 | IPR036420 | - | |
| Phco2g00794 | 234 | ProSiteProfiles | BRCT domain profile. | 100 | 184 | IPR001357 | - | |
| Phco2g00794 | 234 | ProSiteProfiles | BRCT domain profile. | 182 | 234 | IPR001357 | - | |
| Phco2g00794 | 234 | Gene3D | BRCT domain | 97 | 184 | IPR036420 | - | |
| Phco2g00794 | 234 | CDD | BRCT | 103 | 170 | - | - | |
| Phco2g00794 | 234 | Gene3D | BRCT domain | 185 | 232 | IPR036420 | - | |
| Phco2g00794 | 234 | Gene3D | BRCT domain | 33 | 94 | IPR036420 | - | |
| Phco2g00794 | 234 | PANTHER | DNA REPLICATION REGULATOR DPB11-RELATED | 8 | 229 | - | - | |
| Phco2g00794 | 234 | CDD | BRCT_TopBP1_rpt2_like | 186 | 234 | - | - | |
| Phco2g00794 | 234 | FunFam | Transcription coactivator | 97 | 185 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco2g00794 | 2 | 8792179 | 8798767 | Phco2g00794 | 2 | 8792179 | 8798767 | ECH |