Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00763 ATGAAATTGACTTGGAAGAACAACAAGAACAAGAAACGTTGTTTACCCACGTTGTCTCACTTCACTGACCTTCCCTTTGAGCATCACGATCAACCCCATTCACAAAATGGCGTGCCTATTCCCGATCCCGACCAATCTCGCGCTACACAATTGGCGAATGAATTTCAAGCTCAAGGAGACAAGCTCGCTATGGATGGGAAGTACCAGGAAGCACTAAGTAAATGGGAAGCTGCTCTTGCTTTGGCACCTGATGTTCCAATTTTGCATGAACAGAAAGCCCAAATTTTACTAGAAATTGGAGACACTTGGAATGCTTTAAAGGCTGCAACTCGAGCGACTGAATTGGACCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAACACAACTGAATTTTGGTGAGCCAGATAATGCTATTGAAAGCTTTGACCGAGCTTTAGCTCTCAAGCCTGATTATGAGGAAGCTAAAGATGATAGGAAAACCTCTTTACATCTTGTAAAGAAGAGAAAGCAACTTCATTCATCTGGCCTGAGTGCTACTCAAAATCGTTATGTAGTGGGTGAAAAGGATGAAAGCCAGTGA 585 0.4393 MKLTWKNNKNKKRCLPTLSHFTDLPFEHHDQPHSQNGVPIPDPDQSRATQLANEFQAQGDKLAMDGKYQEALSKWEAALALAPDVPILHEQKAQILLEIGDTWNALKAATRATELDPSWAEAWVTLGRTQLNFGEPDNAIESFDRALALKPDYEEAKDDRKTSLHLVKKRKQLHSSGLSATQNRYVVGEKDESQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00763 194 MobiDBLite consensus disorder prediction 174 188 - -
Phco2g00763 194 ProSiteProfiles TPR repeat profile. 52 85 IPR019734 GO:0005515
Phco2g00763 194 MobiDBLite consensus disorder prediction 25 44 - -
Phco2g00763 194 Gene3D Tetratricopeptide repeat domain 42 186 IPR011990 GO:0005515
Phco2g00763 194 SUPERFAMILY TPR-like 50 171 IPR011990 GO:0005515
Phco2g00763 194 SMART tpr_5 52 85 IPR019734 GO:0005515
Phco2g00763 194 SMART tpr_5 120 153 IPR019734 GO:0005515
Phco2g00763 194 SMART tpr_5 86 119 IPR019734 GO:0005515
Phco2g00763 194 Pfam Tetratricopeptide repeat 92 153 - -
Phco2g00763 194 MobiDBLite consensus disorder prediction 172 194 - -
Phco2g00763 194 PANTHER OSMOSIS RESPONSIVE FACTOR 1 193 - -
Phco2g00763 194 ProSiteProfiles TPR repeat region circular profile. 120 152 - -
Phco2g00763 194 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00763 Phco-Chr2 8263398 8268153 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00763 2 8263398 8268153 Phco2g00763 2 8263398 8268153 ECH