Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00744 ATGCCCCAAGTAGAAGCCGCAGAGAGAAGAATGACTTCCTCTGAAGCCTTCCTCAGCGTTGAAGAAGATGGTTCTACTGCTAACAAAAAGCGCGGTTTGTTCTACGATGTTTATGGACCCGAAGGCAAGGCAGATGTTGTTTTCAATTCTCCAGAAGATAATTCAATTCTTGATCTAAAGGATATTCAAGGACTTGTAACTTGGGTGCTTGGTGAAGGATTTATGCCGTCATGGGTTTTTATTAAGAATAAACCTCTTATTCCCAAAGTGGTCATGCTCTATATGCCAGGCCTAGATGCAGCTTTGTTCTTGTCACTGTCTAAACTGCTTCATAGTATAAAAAAAATCTGTGGCAAACCAAGGCCTGTCCTGGCTCTTAGCTGTGTGTCAGATAGTATGCAGACGATAGATGCACTTCTAACATGCAAGATGAAAAGAAAAAGGGATGAGAATAGTTCACTTATGAGGAAACCTGCTCTGACATCTCATCAAGAAGAAGGTTGTCGAGATACAGACAGTCTATCATTTACTGAGCTTACTAAAGACATACCTTTCCCAGTTACATACTATACACTAACTGAGAAAGAGCTGGAAGAGAATGGATATTCTTTTAATCAACCAGGTTTTCTTTCTACTTTGCCTGCACCTTCAGGATCTCCTTTTTATGAGATGTTGGCACTTGATTGTGAGATGTGCGTAACAAATGAAGGTTTTGAGCTGACAAGAATTAGTCTAGTCGATGTCAAAGGACAGGTTTTGATAGATAGATTGGTTAAACCATCAAATGCTATCGTTGACTACAACACAAGATTTAGTGGAATAACGCCTGAGATGTTAGATGGGGTGACAACAAGTCTGAGAGACATTCAGGAACTGTTCCTAGAGTTTGTTTACAAGGAGACTATCCTTGTTGGGCATTCTCTGGAAAATGATTTATTAGCATTGAAGATATCCCATGACGTGATCATAGACACAGCAGTGTTGTACAGACACCCCAGAGGAACATCTCATAAAAAAGCTCTAAGGTTCCTTACTAAGAAATTTCTTGCAAGGGAGATACAACAATCAGAGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCCTTGAATTGGCACTATTGAAGATCAGAAATGGGCCTGACTTTGGTTCCCCTCCGTCCTTTACAAAGAAAAAGTTCCTTTCTATTCTGAGTGAGTCTGGCAAAACTTCATCATTGATTGATGATATATCCATAGTAAAACGGTATGCCTCTGAGTCCTCTAATGCAATTCCAGTGATCTCTGATGATGAAGCACTTGCAAAGACCAACAAGGAGGTGAAGAATGACAAGGTACATTTTATCTGGACACAGTTTTCAGAGCTACACTCATACCTGAAGAAGCAAGCTGAAGATTCTGATAGCTTGAATGAAAGACTTGCAGAGATGATGGCATTGCAAACATGTCAGAAAAATTCTGATAAACAGAGAGGCTTTAAGTTGAAAGCACCTGCTGAACTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCATAATCTCTATTTGTCATTACCCACAAATGCTATGATGATAATTTTTACTGGACACGGCGACACTGCCATTGTCCGCAGGTTGAGGAGAATGCTTGCAGAGCAGACTGAATCTAATGTATGTCGTGAAAAGATTGTGGACATTTTGGCAGAATTTCAGGCTCAAGCTGAAGTAGCATTGTGTTTTGTAGGCATAAAGCATTGA 1740 0.4029 MPQVEAAERRMTSSEAFLSVEEDGSTANKKRGLFYDVYGPEGKADVVFNSPEDNSILDLKDIQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMLYMPGLDAALFLSLSKLLHSIKKICGKPRPVLALSCVSDSMQTIDALLTCKMKRKRDENSSLMRKPALTSHQEEGCRDTDSLSFTELTKDIPFPVTYYTLTEKELEENGYSFNQPGFLSTLPAPSGSPFYEMLALDCEMCVTNEGFELTRISLVDVKGQVLIDRLVKPSNAIVDYNTRFSGITPEMLDGVTTSLRDIQELFLEFVYKETILVGHSLENDLLALKISHDVIIDTAVLYRHPRGTSHKKALRFLTKKFLAREIQQSENGHDSIEDARATLELALLKIRNGPDFGSPPSFTKKKFLSILSESGKTSSLIDDISIVKRYASESSNAIPVISDDEALAKTNKEVKNDKVHFIWTQFSELHSYLKKQAEDSDSLNERLAEMMALQTCQKNSDKQRGFKLKAPAELKEILARMDARIHNLYLSLPTNAMMIIFTGHGDTAIVRRLRRMLAEQTESNVCREKIVDILAEFQAQAEVALCFVGIKH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00744 579 SUPERFAMILY Ribonuclease H-like 224 377 IPR012337 -
Phco2g00744 579 CDD REX1_like 225 374 IPR034922 -
Phco2g00744 579 Pfam Exonuclease 226 372 IPR013520 -
Phco2g00744 579 Gene3D - 222 382 IPR036397 GO:0003676
Phco2g00744 579 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 49 389 IPR047021 GO:0004527
Phco2g00744 579 SMART exoiiiendus 223 382 IPR013520 -
Phco2g00744 579 Coils Coil 460 480 - -
Phco2g00744 579 FunFam RNA exonuclease NEF-sp 221 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00744 Phco-Chr2 7936463 7948397 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00744 2 7936463 7948397 Phco2g00744 2 7936463 7948397 ECH