Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00737 ATGATCACGGGAGAGGATTTGTACAAGGTGATGTGCGCCATGGTGCCGCTGTACTTCGCAATGCTGGTGGCGTACGGTTCGGTGAAATGGTGCAAGATGTTCACCCCGGAGCAGTGTTCCGGCATAAATCGGTTCGTGGCGGTTTTCGCTGTTCCGGTCCTCTCTTTCCACTTCATTTCGATGAACAACCCGTACCAAATGAACACCAGGTTCATCATCGCGGACACACTCTCCAAGCTCCTCGTGCTTCTCTTCCTCTCGCTTTGGGCCATTTTCTTCGCAAAAGGCTCACTGGAGTGGCTCATCACTCTCTTCTCCCTCGCCACCCTTCCCAACACCCTCGTCATGGGCATTCCCCTCCTCCAAGCCATGTACGGCGACTTCACCCAGTCCCTCATGGTGCAACTCGTCGTCCTCCAATGCATCATATGGTATACTCTACTTCTGTTTTTGTTCGAGTACAGAGCTGCGACGCTTTTGATCCAGAGGCAGTTTCCGGGACAAGCGGCGGCGTCCATCACGAAATTCGAGGTGGACGGCGACGTTATATCGCTGGACGGCCACGACATGCCGCTGCGGACGGAGTCAGAGACCGATGACCTCGGGCGGATCCGGGTGCGGATCCGCCGATCCGTTTCGTCGGTGCCGGAGTCCAGCTCCTCCATCGGCAACGCCGCCGTCGTCACTCCGCGACCCTCCAACCTCTCAAACGCCGACATTTTCTCCATCAACACGCCCTTGCACCTGCACGACGGCGATCTCCCTGCCGGCGCCAGCCCCCACCTCTCTGGCTACGCCTCCTCCGACGCGTACTCGCTGCAGCCCACGCCGCGGGCCTCCAACTTCAACGAGATGGAGGCCGGCACCCCCGTCTGGGGGCGCTCACCGGTCGCCGCAGGAAGACTGTGCCTCCAGTCGTCCCCGGTGGCCAGGGTTGTGTGGGAGTCACCGGGGAAATACGGTAGAGGAGAAGAGACACAAGGTTGCAAGGACATCACTCTCTCAGATAAAGAGATGAGCTTCAGAGACAGCAGCAAAGTCCCAATGCCGGGGGATGCTGCAGAGCAGAAAATGCCACATGCCTTTGTCATGATGAGGCTTATACTGGTTGTAGTGGGAAGAAAACTTTCCCGAAATCCTAATACATATTCTAGTGTATTAGGACTTCTTTGGTCTTTAATCTCTTTCAAATGGAATATGGAAATGCCAAGTCTCATCAAATCATCAGTCAAAATCGTCTCAGATGCCGGCCTTGGGATGGCTATGTTTAGCTTAGGGCTTTTCATGGCCCTTCAGCCCCGTATCATAGCCTGTGGTACTAAAAGGGCAGTTATGGGCATGGTCATTCGCTTCCTGTGTGGGCCTCTTGTGATGTCTGCATCTTCCATTGCCATTGGACTAAGACATGACATACTTCACACTGCCATTGTACAGGCTGCTCTTCCACAGGGGATAGTGCCATTTGTATTTGCCAGAGAATATGGACTGCATCCTGATATTTTGAGCACAGGGGTTATCTTCGGCATGCTGGTTTCCTTACCAATAACTCTCTTATATTACATATTTCTTGGCTTATGA 1578 0.5387 MITGEDLYKVMCAMVPLYFAMLVAYGSVKWCKMFTPEQCSGINRFVAVFAVPVLSFHFISMNNPYQMNTRFIIADTLSKLLVLLFLSLWAIFFAKGSLEWLITLFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIQRQFPGQAAASITKFEVDGDVISLDGHDMPLRTESETDDLGRIRVRIRRSVSSVPESSSSIGNAAVVTPRPSNLSNADIFSINTPLHLHDGDLPAGASPHLSGYASSDAYSLQPTPRASNFNEMEAGTPVWGRSPVAAGRLCLQSSPVARVVWESPGKYGRGEETQGCKDITLSDKEMSFRDSSKVPMPGDAAEQKMPHAFVMMRLILVVVGRKLSRNPNTYSSVLGLLWSLISFKWNMEMPSLIKSSVKIVSDAGLGMAMFSLGLFMALQPRIIACGTKRAVMGMVIRFLCGPLVMSASSIAIGLRHDILHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPITLLYYIFLGL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00737 525 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 524 - -
Phco2g00737 525 NCBIfam auxin efflux carrier 1 525 IPR014024 -
Phco2g00737 525 Pfam Membrane transport protein 10 520 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00737 Phco-Chr2 7828000 7834523 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00737 2 7828000 7834523 Phco2g00737 2 7828000 7834523 ECH