Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00734 ATGAGCACTGCACAACAAGAGAAGTTTGTTAGGTTTAGGGATTGGAATTTGGAGAAGAGTTCTGAGAGCAATTATTCTGAGATTAAAATTGCACACTCGGGGATATTTAGAACGACATTAAGTTCAGTTTCTGAGAAGTTTCAAAATGGATTGGAATCGGGTTCTGATAGGATAAAAAGCTTCAGAACATCATTAAAATCTTTTCCCTATAGTAGTGCTCTTTCTAGAAGTTTTAGTTCTAGAAAGAAAATACTTGATCCACAGGGTCCATTCCTTCAAAGGTGGAACAAGATTTTTGTATTATTATGTGTTATCGCAGTATCACTGGATCCTTTGTTCTTTTATGTCCCGGTTATTGATGATGAGAAAAAATGTCTTTCACTGGACAGTAAGATGGAGATTACAGCAACTGTCTTAAGATCTTTCTCTGATGCTTTTTATATAATCCACATGATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGTGTATTTGGAAGAGGTGTTTTGGTTGAAGATTCTTGGGCAATAGCAAGGAAGTATCTATCATCATATTTCTTAGTTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTCTAGTTATCATTCCAAAGATGAGTGGTTTTAAATCACTTAATACCAAGAACTTGCTGAAATTTGTTGTCTTCTTCCAATATGTGCCTCGTTTATTGCGGGTCATTCCATTATATAGAGAAGTTACAAGAGCTTCTGGCATTCTCACTGAAACTGCTTGGGCTGGAGCTGCATTTAATCTCTTTCTTTACATGCTTGCAAGTCATGTTGTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACATGTTGGCAAGAAGCCTGTCGAAGTAATACAACAGTGTGTAACAAGGCAGACATGTATTGTAATGATTATTGGGGTGGGTTGAGCAAAATTTCGACATTCCTGAATACTTCTTGCCCAATTCAGAACGAAGATAAAAATCTCTTTGATTTTGGAATGTTCCTCGATGCTCTTCAATCCGGTGTTGTGGAGTCAAGAGATTTTCCACAAAAATTCTTTTACTGCTTTTGGTGGGGCTTAAAAAATTTGAGTTCTCTTGGTCAGAACCTGGGAACAAGTACCTATGTTTGGGAAATATGCTTTGCAGTTTTCATTTCTGTATCTGGTTTGGTGTTATTTTCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACAACCACTAGATTGGAGGAGATGAGAGTAAAGAGGAGGGATGCAGAACAGTGGATGTCTCACCGATTGCTTCCTGATGGCCTGCGAGTGCGAATCAGACGATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTGGATGAAGACAATTTGGTTCGTAATCTTCCCAAGGATTTAAGAAGAGACATTAAGCGACATCTTTGTTTGGCTTTGCTGATGAGAGTGCCAATGTTTGAGACGATGGATGACCAACTTTTGGATGCAATGTGTGACCGTCTGAAGCCGGTGCTTTTCACTGAAGAAAGCTACATTGTGAGGGAAGGAGACCCAGTTGATGAGATGCTGTTCATAATGCGTGGGAAGTTATTGACCATAACAACTAACGGTGGAAGAACCGGTTTCTTCAACTCCGAGTATCTGAAAGCTGGCGACTTCTGTGGAGAGGAGCTTCTGACGTGGGCCTTGGATCCCCATTCGTCATCCAACCTTCCCACCTCAACAAGAACAGTCCAAACTCTTTCAGAAGTGGAAGCCTTCGCCCTGAAAGCTGATGACTTGAAGTTCGTGGCATCACAGTTTCGGCGCCTTCACAGCAAGCAGCTACGCCACACTTTCAGGTTCTACTCGCAACAATGGCGGTCGTGGGCTGCGTGTTTCATTCAAGCTGCATGGCGGCGCTATAGTAAGAGGAAGCTTGAAGAATCCCTGGTTGAAGACGAGAATCGACTGCAAAATGTGTTGGCTAAATCAGGTGGAAGCTCACCTAGCCTTGGTGCTACAATATATGCTTCAAGGTTTGCTGCTAATGCACTTACATTGCTACGCCGCAATAATGGTGCAAAGAAGGGTAGGGTGGCAGAGAGATTACCCCCCATGCTTTTTCAGAAGCCTGCAGAACCTGATTTTACTGCGGATGAACAATAA 2160 0.4176 MSTAQQEKFVRFRDWNLEKSSESNYSEIKIAHSGIFRTTLSSVSEKFQNGLESGSDRIKSFRTSLKSFPYSSALSRSFSSRKKILDPQGPFLQRWNKIFVLLCVIAVSLDPLFFYVPVIDDEKKCLSLDSKMEITATVLRSFSDAFYIIHMIFQFRTGFIAPSSRVFGRGVLVEDSWAIARKYLSSYFLVDILAVLPLPQVVILVIIPKMSGFKSLNTKNLLKFVVFFQYVPRLLRVIPLYREVTRASGILTETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWQEACRSNTTVCNKADMYCNDYWGGLSKISTFLNTSCPIQNEDKNLFDFGMFLDALQSGVVESRDFPQKFFYCFWWGLKNLSSLGQNLGTSTYVWEICFAVFISVSGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDGLRVRIRRYEQYKWQETRGVDEDNLVRNLPKDLRRDIKRHLCLALLMRVPMFETMDDQLLDAMCDRLKPVLFTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPTSTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRSWAACFIQAAWRRYSKRKLEESLVEDENRLQNVLAKSGGSSPSLGATIYASRFAANALTLLRRNNGAKKGRVAERLPPMLFQKPAEPDFTADEQ 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00734 719 SUPERFAMILY Voltage-gated potassium channels 86 411 - -
Phco2g00734 719 SMART cnmp_10 489 620 IPR000595 -
Phco2g00734 719 SUPERFAMILY cAMP-binding domain-like 418 611 IPR018490 -
Phco2g00734 719 ProSiteProfiles cAMP/cGMP binding motif profile. 489 573 IPR000595 -
Phco2g00734 719 Coils Coil 641 661 - -
Phco2g00734 719 Gene3D - 95 413 - -
Phco2g00734 719 Gene3D Jelly Rolls 487 607 IPR014710 -
Phco2g00734 719 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 714 - -
Phco2g00734 719 Pfam Ion transport protein 94 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phco2g00734 719 CDD CAP_ED 489 620 IPR000595 -
Phco2g00734 719 FunFam Cyclic nucleotide-gated ion channel 1 416 480 - -
Phco2g00734 719 Pfam Cyclic nucleotide-binding domain 510 600 IPR000595 -
Phco2g00734 719 Gene3D Helix hairpin bin 415 480 - -
Phco2g00734 719 FunFam Cyclic nucleotide-gated ion channel 1 487 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00734 Phco-Chr2 7790340 7796546 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00734 2 7790340 7796546 Phco2g00734 2 7790340 7796546 ECH