Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00704 | ATGTATGAGCCAAAAAACATCCTCATAACTGGAGCTGCTGGTTTCATAGCCTCACATGTCACTACCAAGCTAATCAACAAGTACCCTAGCTACAAGATTGTAGCTCTTGATAAACTAGATTATTGCTCCACTTTCAGGAATTTGAAGTCATGTATTTCATCACCAAACTTCAAATTTATCAAGGGTGATATAGCTACTGCAGATATTGTGAATCATGTTTTGATAGAAGAGAAAATAGACACCATTATGCATTTTGCTGCTCAAACCCATGTGGACAATTCATTTGGAAACTCCATGGAATTCACCTACAATAATATCTATGGCACTCATGTGCTTCTTGAAGCTTGTAGGGTCACCGATTGTGTCAAAAGATTCATTCATGTTAGCACAGATGAAGTCTATGGTGAAACAGACTTAGAGGATGATATTGGAAACCATGAGGCGTCTCGGCTTCTACCCACCAATCCTTATTCTGCAACAAAAGCAGGCGCAGAAATGTTGGTCATGGCTTATCACAGGTCTTATGGTCTTCCAGTAATAACTTCCAGAGGCAATAATGTGTATGGTCCCAACCAATACCCAGAGAAGCTTGTTCCCAAGTTCATCCTTCTTGCCATGAAGGGTGAGAAATTGCCAATCCATGGAGATGGATCGAATGTGAGGAGCTACCTCCACTGTGATGATGTGTCAGAAGCTTTTGATGTCATAGTCCACAGAGGAGAGATTGGCCAAATTTACAACATTGGCACCAAGAAAGAAAGGAGTGTGTTAGATGTTGCAGAGGAAATATGCAAACTCTTTAAATTGAATCCTAAAGATGTTATTGAGTTTGTTCAAGATAGGCCTTTCAATGATAAGAGATATTTTCTTGATGATCAAAAGCTGAAACTACTTGGTTGGGAGGAGAGAATTCCCTGGGAGGAAGGACTGAAGAGGACAATTGACTGGTACCAAAAGAATCCTGATTGGTGGGGTGATGTTTCTCCTGCTTTAAACCCTCATCCACGTTTCTCAGCCATCAATCTCTCTGATGAAGCTCATTGGTCCTTTCAATATGGATACTCTAGGCTTGCAAGGTCATTTACTGAAGTTGGAAGAAGCAATTCAGGATACAAGTTTTTGATATATGGGAGGACAGGTTGGATAGGGGGGTTGTTGGGAAAGCTTTGTGATGAAGACAAAATTGATTGGGAATATGGAAGAGGAAGATTGCAAGATAGGAAATCACTTGAGGAGGATATAAGGAGGGTAAAGCCAACCCATGTGTTGAGTGCAGCTGGTGTTACAGGAAGGCCTAATGTTGATTGGTGTGAATCACACAAGGTTGAAACTATAAGAACCAATGTTGTTGGTACTCTAACACTGGCTGATGTTTGCAAGGAGCAAAACTTATATATGATGAACTTTGCAACTGGTTGCATATTTGAGTATGACAAGGAGCATCCTCTAGGATCAGGAATTGGGTTCAAGGAAGAGGACAAGCCAAATTTCATAGGCTCCTTCTATTCAAAGACCAAAGCCATGGTGGAGGACCTTCTAAGAAATTATGAAAATGTCTGCACATTGAGAGTTAGAATGCCAATATCCTCAGATCTTAGCAATCCAAGAAACTTCATCACAAAGATTTCTCGTTACAGTAAAGTGGTAAACATACCTAATAGCATGACAGTGCTAGATGAACTCTTACCCATATCCATTGAAATGGCTAAGAGGAACCTAAGAGGGATTTGGAACTTCACCAACCCTGGGGTCGTTAGCCACAACCAGATATTAGAATTGTACAGGGATTACATAGATCCACAATTTAAATGGGAGAATTTTGATTTGGAAGAACAAGCAAAGGTAATAGTTGCTCCAAGGAGTAACAATGAAATGGATGCTTCAAAGCTCAAAAATGAGTTCCCAGGATTGTTGTCCATCAAAGATTCCATTATCAAGTTTGTCTTTGAGCCTAACAAGAAAACTTGA | 1968 | 0.4014 | MYEPKNILITGAAGFIASHVTTKLINKYPSYKIVALDKLDYCSTFRNLKSCISSPNFKFIKGDIATADIVNHVLIEEKIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVLLEACRVTDCVKRFIHVSTDEVYGETDLEDDIGNHEASRLLPTNPYSATKAGAEMLVMAYHRSYGLPVITSRGNNVYGPNQYPEKLVPKFILLAMKGEKLPIHGDGSNVRSYLHCDDVSEAFDVIVHRGEIGQIYNIGTKKERSVLDVAEEICKLFKLNPKDVIEFVQDRPFNDKRYFLDDQKLKLLGWEERIPWEEGLKRTIDWYQKNPDWWGDVSPALNPHPRFSAINLSDEAHWSFQYGYSRLARSFTEVGRSNSGYKFLIYGRTGWIGGLLGKLCDEDKIDWEYGRGRLQDRKSLEEDIRRVKPTHVLSAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEQNLYMMNFATGCIFEYDKEHPLGSGIGFKEEDKPNFIGSFYSKTKAMVEDLLRNYENVCTLRVRMPISSDLSNPRNFITKISRYSKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNQILELYRDYIDPQFKWENFDLEEQAKVIVAPRSNNEMDASKLKNEFPGLLSIKDSIIKFVFEPNKKT | 655 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00704 | 655 | PANTHER | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED | 1 | 336 | - | - | |
| Phco2g00704 | 655 | CDD | dTDP_GD_SDR_e | 5 | 322 | IPR005888 | GO:0008460|GO:0009225 | |
| Phco2g00704 | 655 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1 | 327 | IPR036291 | - | |
| Phco2g00704 | 655 | FunFam | Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase | 362 | 655 | - | - | |
| Phco2g00704 | 655 | Gene3D | - | 363 | 655 | - | - | |
| Phco2g00704 | 655 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 369 | 633 | IPR036291 | - | |
| Phco2g00704 | 655 | FunFam | UDP-glucose 4,6-dehydratase | 7 | 209 | - | - | |
| Phco2g00704 | 655 | CDD | dTDP_HR_like_SDR_e | 372 | 644 | - | - | |
| Phco2g00704 | 655 | Pfam | GDP-mannose 4,6 dehydratase | 8 | 313 | IPR016040 | - | |
| Phco2g00704 | 655 | Gene3D | - | 7 | 311 | - | - | |
| Phco2g00704 | 655 | Pfam | NAD dependent epimerase/dehydratase family | 400 | 538 | IPR001509 | - | |
| Phco2g00704 | 655 | Gene3D | - | 198 | 320 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g00704 | Phco-Chr2 | 7298080 | 7300120 | Dispersed/Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco2g00704 | 2 | 7298080 | 7300120 | Phco2g00704 | 2 | 7298080 | 7300120 | ECH |