Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00635 ATGGCCACTACTCTCTCTGAAGCCTATAGAGACCACCCTCTTCATCTCCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCTTACCTGATACCCATGCATGGCCTCAAACTGAAGATGGTCATGATGATGATGATCATCATCATGGAGGTGGATCATGCATACCCATCATTGACCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAACTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTAAGTGTTGTTGAAGAGGTTGAAAAAGAGGCAAAGAAGCTCTTTGCCCTCCCCGCCGACCGGAAGTTGAAGGCCCTACGATCCGCCGCTGGGGCCACCGGCTACGGCCGGGCACGGATATCATCCTTCTTCCCCAAGCACATGTGGCATGAAGGATTCACCATCATGGGGTCTCCATGCGATGATGCCAAAAAAATTTGGCCTAATGACCATACACGGTTTTGCAACATAATGGAGAATTACCAGAAGCAAATGAAGTTGCTAGCAGAGAAGCTGACCCAGATGATGTTGAGCTTGTTGGGGATTTGTGAGGATGAAAAGGGGTGGATTGGTTCAAGTAACCTGTGTGAAGCTGTTCAGCTGAACTTCTACCCTTGTTGCCCTGAGCCTAACAGAGCCATGGGTCTAGCCCCTCACACGGACACTTCCCTCTTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAAATCTTCAAGGAGGGTGCAGGGTGGGTCCCTGTGCACCCTCACCCTAACACCCTTGTTGTTCACACCGGAGACATTCTTCACATCTTGTCCAACTCAAGGTTCCCTTGTGCACTGCATCGTGTCATGGTGAACAGTGCAAGCCAAAGATACTCTGTGGCCTATTTCTATGGCCCCCCTTTGGATTATGTACTTTCTCCCTTGCTTCTTAGCTCCTTCCCTCGTTTTCGTTCTTTGTCTGTCAAGGAGTATATTGGCATCAAGGCCAAGAACCTTGGTCAAACATTGTCTTTGATTAGCACCATTCAAAACTAA 1047 0.4852 MATTLSEAYRDHPLHLHHIIPLDFSSLRTLPDTHAWPQTEDGHDDDDHHHGGGSCIPIIDLMDPNAMELIGLACENWGAFQLKNHGIPLSVVEEVEKEAKKLFALPADRKLKALRSAAGATGYGRARISSFFPKHMWHEGFTIMGSPCDDAKKIWPNDHTRFCNIMENYQKQMKLLAEKLTQMMLSLLGICEDEKGWIGSSNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLFTILHQSQTNGLQIFKEGAGWVPVHPHPNTLVVHTGDILHILSNSRFPCALHRVMVNSASQRYSVAYFYGPPLDYVLSPLLLSSFPRFRSLSVKEYIGIKAKNLGQTLSLISTIQN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00635 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 56 328 - -
Phco2g00635 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 156 IPR026992 -
Phco2g00635 348 Coils Coil 166 186 - -
Phco2g00635 348 Pfam 2OG-Fe(II) oxygenase superfamily 206 303 IPR044861 -
Phco2g00635 348 FunFam Gibberellin 3-beta-dioxygenase 1 18 331 - -
Phco2g00635 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 303 IPR005123 -
Phco2g00635 348 Gene3D - 17 336 IPR027443 -
Phco2g00635 348 SUPERFAMILY Clavaminate synthase-like 17 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00635 Phco-Chr2 6346316 6348224 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00635 2 6346316 6348224 Phco7g00799 7 6240821 6242311 PCT
Phco7g00798 7 6235418 6236572 Phco2g00635 2 6346316 6348224 PCT