Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00617 ATGGATGTACATCATGTTTGCAGCCCCACAAAACACGCCTATATGGAACCCTTTGGAGGAATTATTCAAGATTTCAGTGGAAGGGTTGCATGTTACAAACATGATTGGACCAGTGCATTCCGTTCTGGCATTAAGATTCTGGCTCCAACTTTCTACATATTCTTCGCTTCAGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAGCAGGGATACAGGTGGAAGCTTGAGTACAGTAGAAACATTGGCATCAACTGCTATTTGTGGAATTATCCATTCAATATTTGGTGGTCAGCCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTCTATCAGTTCTGCACAAAAAGTCCAGATCTAGGTGTTGAGTTGTTTCTGCCTTGGGCTGGCTGGGTTTGTGTGTGGACATCTTTGTTGCTGATTATGCTTGCAATTTTCAATGCCTGCACAATTATCTCGAGGTTCACAAGAGTCGCAGAGGAATTATTTGGCATGTTAATTACTGTCCTTTTCTTCCAAGAGGCTATACTGGGAATCAGGAATGAATTCAAGACACCGAAATCTGAAAATCCTTCTGCAGAGGAATATCAATTCCATTGGCGGTATACAAACGGACTACTTGCAGTCATTTTCTCTTTGGGAATACTTCTCACTGCCCTGATGAGTAGAAGAGCAAGAACATGGAGACTTGGAGCAGGGTGGCAACGAGCTCTCGTTGCAGATTATGGGATTCCACTGATGGTTGTGATTTGGACTGGACTATCATATACTGTACCAAGCAAAGTTCCATCTTCGATTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAACCTGAGTCTCTCTACCACTGGACAGTAATAATGGATATGGGAAAGGTACCCGTGCTTTACATCTTTGCAGCATTTATTCCAGCTGTGATGGTAGCAAGTTTATACTTCTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATATAATCTTCAAAAACCATCTGCTTTCCACTATGATATGTTCCTTCTTGGTATAATGACTCTGATTTGCGGTTTACTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCACACAAAGAGTTTGGCAGTTCTTAGGACTCAGTTAATCCGAAAGAAAGTGGTAAAAAGTGCCGAGGATTGCATTAAACAACAAGGAAGCACCACTGAATTATATGGAAAGATGCAAGCTGTGCTTGTAGAAATGGATTCTGAACCAACTACTAATGCGATGACGAATTTGAAGGAGGCTGTAATGAAATCTTCCGAAAATAATGGTGAAAATCAAACATTTGATCCTGAGAAGCACATTGATGCCTATATACCTGTCCGTGTTAATGAGCAAAGAATGAGTAACTTATTACAGTCTCTCCTGATTGGCCTATCAATTTTTTCCATTTCTGTCATCAAAATGATACCTACTTCAGTTCTGTGGGGATATTTTGCATACATGGCTATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATATTGCTTCTCTTCATCTCACCAAGCCGGCGCAACAAAATTTTGGAAGGTCCTCATGCCTCGTTTATAGAATCAGTGCCATTCAAGACCATAGCCACATTCACAATCTTGCAGTGTGTGTACTTTTTAGTATGTTATGGGGTGCAATTGATACCTATTGGAGGAATACTTTTCCCATTACCTTTCTTCCTTCTCATATTTATAAGAGAGCATGTGCTTCCATGCATATTCAATCCTGTTGATCTTCACGAACTAGATGCTGCTGAGTACGAGGAAATTCTTGGAGTTCCAAATACGCACAAAAATCCAAATGATGATGATGATGATTACAACGCTGAGATATTGGATGAGATGACAACTAACAGGGGACAATTAAAGCTTAGAACCGTAACCATAAAGAACAGAACCCCCGTTGAAGACATGCAACAAATATATTTATGA 1980 0.4076 MDVHHVCSPTKHAYMEPFGGIIQDFSGRVACYKHDWTSAFRSGIKILAPTFYIFFASALPVIAFGEQLSRDTGGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYQFCTKSPDLGVELFLPWAGWVCVWTSLLLIMLAIFNACTIISRFTRVAEELFGMLITVLFFQEAILGIRNEFKTPKSENPSAEEYQFHWRYTNGLLAVIFSLGILLTALMSRRARTWRLGAGWQRALVADYGIPLMVVIWTGLSYTVPSKVPSSIPRRLVCPLPWEPESLYHWTVIMDMGKVPVLYIFAAFIPAVMVASLYFFDHSVASKMAQQKEYNLQKPSAFHYDMFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRTQLIRKKVVKSAEDCIKQQGSTTELYGKMQAVLVEMDSEPTTNAMTNLKEAVMKSSENNGENQTFDPEKHIDAYIPVRVNEQRMSNLLQSLLIGLSIFSISVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFISPSRRNKILEGPHASFIESVPFKTIATFTILQCVYFLVCYGVQLIPIGGILFPLPFFLLIFIREHVLPCIFNPVDLHELDAAEYEEILGVPNTHKNPNDDDDDYNAEILDEMTTNRGQLKLRTVTIKNRTPVEDMQQIYL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00617 659 Pfam HCO3- transporter family 459 550 IPR011531 GO:0006820|GO:0016020
Phco2g00617 659 Pfam HCO3- transporter family 199 383 IPR011531 GO:0006820|GO:0016020
Phco2g00617 659 Pfam HCO3- transporter family 17 192 IPR011531 GO:0006820|GO:0016020
Phco2g00617 659 PANTHER ANION EXCHANGE PROTEIN 14 607 IPR003020 GO:0005452|GO:0006820|GO:0016020
Phco2g00617 659 FunFam probable boron transporter 2 28 70 - -
Phco2g00617 659 Gene3D Helical hairpin bin 28 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00617 Phco-Chr2 6120150 6125391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00617 2 6120150 6125391 Phco2g00617 2 6120150 6125391 ECH
Phco7g00786 7 6092263 6096335 Phco2g00617 2 6120150 6125391 ECH
Phco2g00617 2 6120150 6125391 Phco7g00786 7 6092263 6096335 PCT