Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00610 ATGGCAAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGATGTTTGAGCTCTTCTATGATGTTGCTCCAAAAACTGCTGAAAATTTCCGTGCATTATGCACAGGAGAAAGCGGTGTTAGTCCAAATACTGGAAAATCACTGCACTACAAGGGGTCTTTCTTCCATCGAATTGTAAAAGGATCTGTTGCCCGGGGTGGTGATTTTGTGAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCCGGTCTTCTATCTATGCCTGTTGCTGTTCGTGACACTCTTGGTTCTCATTTTATCATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTGGTCTTTGGAAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGCGAACATAATGAGGATGGAAAGAAGATGAAGAAATTAAAAAAGGGAAGAGATGGGTTTCGTGAAACCAATAATCATGAACTGCATAGGAGGAAGAACAGAAAATCTTCAGGAGACAAAAGGAAAAGGAGAAAGTATTACACATCAGAATCTGATAGCTCCTCTGATTCAGACACGAAATCTTCCGAAAGTGGTTGTGATTCTGAATCAGATTTATCTTCATCATCTTACACAAGTTCCTCCAGTGATGACAGGCAGAGAAAGAGGAAGAGATCCAGGAAAGACAGGCACAGACGTGGAAAAAGAAGAGACAAACATCGAGAGAAGAGACGAAGGAAACAAGACAAAAAATCAAAGCGTAGATCAAGAAGGGAATTGGCCAGTCATACTGATTCAGACAGTGAAAGTAAGAGTGGCAACAGCTCCGATGGTGAGAGTTGTGGTGCTCAACCGAAAGATCAGAAGCTTAAAGAACAATCTCAGAGACATGCTGAAGGTCACTATTCCTTAGTTGTGGAGAAAGAATTACCTCCCATGCACCTTAACAAGGAGAAACTGGATATGCTAGAGGAAGAAGAATTCCCAAAGAAGAATGAAGAGCAATGTAGCTATGGCACTAGAGCCAACTATAGATCTGACCGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCCAAGCATGAGTATTAGTCCCCGCAGCGAGAGGAAAAGCCCAAGTTGTCCAAAAAGGAGGTTGAGAAGAAGTCCAAGTGGCAATGGAAGCCCTCGTGCTCCATCACAGAGGAGCTTGAGTCGGAGTCCTGTTAGAAGCACAAGCAGAAGTCCAAACAGAAGAAACATAAGTAGAAGCCCCATGAGAGGTAGGAAGGGAAGAAGTTTCAGTAGAAGCCCTGTGAGATCTCGGGGACACAGAAGTGTTAGTGCAAGCCCTGTAAGATCCCTTTCTCAGAACCACCAGAGGACTTCACCCAGAGCAGCATCACGCAGATCAATCAGCAGAAGTCCTGGAAGATCCCTTTCTCAGGGTCGCGGGAGGAGTTCACACAGAGTACCATCGCGAACATCAATCAGCAGAAGCCCTGTGAGAAATCACAATCAAAGAAGTATCAGTCGAAGCCCGAGATCTCGTGGTCGGAGAAGTGTAAGTGCAAGTCCAGTAAGATCCCTTTCTCGGAGCCACCAGAGTTCACCCAGAGCATCATCACGAAGATCAATGGGCAAAAGCCCTGTGAGAACACTCAATCATAGAGGTGTCAATAGAAGCCCTCTGAGATCTCGTGGTCGTAGTCAAAGAAGTGTCAGTGAAAGCCCTATAAGATCTCTTTCTCAGAGCTGTCAGAGGACTTCACCAAAAGCTCAATCACAGAGATCAATCAGTAGAAGCCCTGTAAGAACTGACAATCATAGAAGCGTAACTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTCAGATCACTTTCTCGGGGCAGCCAGAGGAGTTCATCTAGAGAACCATCACGAAGATCAATAAGCAGAAGCCCAGTAAAAGTGTCAAGAAAGAGTAGCAGGAGTCCAGTTAGATCACCTGCCAGAAGCTCTGGAAGAGTCCCTTTGAGAAGCCATAGCCGGAGTCCAGTTAGGGGGCCAAGCAGAGTCAATAACCGCAATTATTCTAGGAGTCCACGTGGTAGGAGCTTGTCTAGAAGTCTGTCACCTGATGTTTCCCCGAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGTTATAATGGAAGAAATGACCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCGCGCAGAAGAACCCCATCAAGGTTCCGGAGCAGGAGGAGCAGGACACCATCTGTATCACGTAGCCCACGTTATAGGGGTCGACGATACAGTCGAAGCCGAAGCCCTGTTCGCAGTCGTTCACCTGTGGGCACATATCGACCTCGTGCTGAGAGGAGCAGGTCTTTGTCCCAGAGCAGGAGTTCATCACGCTCCAGGAATTCAGTGGAATCACAATCTCCACGAGAGAAGAGCAGGTCAAGGTCCCAAAGCTCAGATGGAAAGAAAGGCCTTGTTTCTTACGGAGATGGTTCTCCAGACTCAGATTAA 2742 0.4602 MAKKKNSLVFMDVSIDGDPVERMMFELFYDVAPKTAENFRALCTGESGVSPNTGKSLHYKGSFFHRIVKGSVARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVAVRDTLGSHFIITFKADPHLDRKHVVFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKMKKLKKGRDGFRETNNHELHRRKNRKSSGDKRKRRKYYTSESDSSSDSDTKSSESGCDSESDLSSSSYTSSSSDDRQRKRKRSRKDRHRRGKRRDKHREKRRRKQDKKSKRRSRRELASHTDSDSESKSGNSSDGESCGAQPKDQKLKEQSQRHAEGHYSLVVEKELPPMHLNKEKLDMLEEEEFPKKNEEQCSYGTRANYRSDRSEGRQPDVMDDQPGKSRSPSMSISPRSERKSPSCPKRRLRRSPSGNGSPRAPSQRSLSRSPVRSTSRSPNRRNISRSPMRGRKGRSFSRSPVRSRGHRSVSASPVRSLSQNHQRTSPRAASRRSISRSPGRSLSQGRGRSSHRVPSRTSISRSPVRNHNQRSISRSPRSRGRRSVSASPVRSLSRSHQSSPRASSRRSMGKSPVRTLNHRGVNRSPLRSRGRSQRSVSESPIRSLSQSCQRTSPKAQSQRSISRSPVRTDNHRSVTRSPVRSHGHRSVSASPVRSLSRGSQRSSSREPSRRSISRSPVKVSRKSSRSPVRSPARSSGRVPLRSHSRSPVRGPSRVNNRNYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSGYRRYSPRRNRSPPPRRRTPSRFRSRRSRTPSVSRSPRYRGRRYSRSRSPVRSRSPVGTYRPRAERSRSLSQSRSSSRSRNSVESQSPREKSRSRSQSSDGKKGLVSYGDGSPDSD 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00610 913 MobiDBLite consensus disorder prediction 432 461 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 657 679 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 178 913 - -
Phco2g00610 913 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 MobiDBLite consensus disorder prediction 322 342 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 753 773 - -
Phco2g00610 913 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 690 718 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 261 295 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 401 415 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 296 310 - -
Phco2g00610 913 Gene3D - 1 175 IPR029000 -
Phco2g00610 913 MobiDBLite consensus disorder prediction 224 253 - -
Phco2g00610 913 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 MobiDBLite consensus disorder prediction 806 830 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 383 397 - -
Phco2g00610 913 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 725 751 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 881 895 - -
Phco2g00610 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Phco2g00610 913 MobiDBLite consensus disorder prediction 555 641 - -
Phco2g00610 913 SUPERFAMILY Cyclophilin-like 4 177 IPR029000 -
Phco2g00610 913 MobiDBLite consensus disorder prediction 462 478 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 786 801 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 862 880 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 349 372 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 479 548 - -
Phco2g00610 913 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00610 Phco-Chr2 6022865 6035496 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00610 2 6022865 6035496 Phco2g00610 2 6022865 6035496 ECH