Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00476 ATGCGACACAAATTATCTTCCATATTCCAATTAAAGAAAGGATTAAACTTGAGAACTCCCTTCACTTCCCAACCACCAAAAATGTCCTCCATGGCTTTCTCCGCCACCTTCTTCACTCCCCTCCATCATTTCACTCATGCCAGAACAAACCCACCAAATTCTCCCTCTTTTCCTTTCATCAAATCCTCCCTTGCTTCCTCCAACTCTACCTTTTTCCATCCAACCCTTTCCCTACAAACCTCACCAACTTTTCCCAGGCTCTTCATAAAGCCTAGGTCTTTCTCAGTTCATGCAAGAGCTGCCACAGAAAAAACCATTTATGATTTTACCGTCAAGGATATTGACAGAAAGGATGTCCCTCTTAACAAATTTAAGGGGAAGGTTCTATTGATTGTCAATGTTGCTTCACGATGTGGTTTGACGTCATCGAATTACTCGGAGCTGTCTCGTTTGTATGAAAAGTATAAGAATCAAGGTTTGGAGGTTCTTGCTTTCCCTTGCAATCAATTTGGTATGCAGGAGCCTGGATCAAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATACAAAGCAGAATTTCCAATTTTTGACAAGGTGGATGTCAATGGACCATTTACGGCTCCAGTGTACCAGTTTCTGAAGTCAAGTGCTGGTGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTATTGAAAGATACCCACCAACAACATCACCTTTCCAAATTGAGAAGGATATTCAGAGGTTACTTGCTGCATGA 792 0.4078 MRHKLSSIFQLKKGLNLRTPFTSQPPKMSSMAFSATFFTPLHHFTHARTNPPNSPSFPFIKSSLASSNSTFFHPTLSLQTSPTFPRLFIKPRSFSVHARAATEKTIYDFTVKDIDRKDVPLNKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKNQGLEVLAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQRLLAA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00476 263 ProSitePatterns Glutathione peroxidases active site. 126 141 IPR029759 -
Phco2g00476 263 ProSitePatterns Glutathione peroxidases signature 2. 163 170 IPR029760 -
Phco2g00476 263 PANTHER GLUTATHIONE PEROXIDASE 98 261 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 PRINTS Glutathione peroxidase family signature 124 141 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 PRINTS Glutathione peroxidase family signature 225 234 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 PRINTS Glutathione peroxidase family signature 160 176 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 FunFam Glutathione peroxidase 97 263 - -
Phco2g00476 263 Pfam Glutathione peroxidase 106 214 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 Gene3D Glutaredoxin 92 263 - -
Phco2g00476 263 CDD GSH_Peroxidase 105 257 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 ProSiteProfiles Glutathione peroxidase profile. 96 263 IPR000889 GO:0004602|GO:0006979
Phco2g00476 263 ProSiteProfiles Thioredoxin domain profile. 100 262 IPR013766 -
Phco2g00476 263 SUPERFAMILY Thioredoxin-like 105 262 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00476 Phco-Chr2 4279878 4283297 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00476 2 4279878 4283297 Phco2g00476 2 4279878 4283297 ECH