Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00463 ATGGATTTCAGAGTGATGGGTTTGGAGTCTCCCTTGTTCCACACGCTGCACCGCATAATGGACACGTCGGACGAAGGTGCAGGGGACAAGACACACAATGCTCCGACGCAGACATACGTGCGAGACGCGAAAGCGATGGCTGCAACACCTGCGGATGTGAAGGAATATCCAAATTCCTACGTGTTCCAGATCGACATGCCGGGTTTGAAATCTGGTGATATAAAGGTTCAAATTGAAGATGATAACGTGCTTTTGATTAGCGGGGAGAGAAAGAGAGAAGAAGAAAAAGAAGGGGTAAATTTTCTGAGAATGGAACGACGGGTTGGGAAATTCATGCGCAAGTTTGTGTTACCTGAAAATGCAAACACTGATGCAATCTCTGCTGTGTGTCAAGATGGGGTTCTCAGCGTTACCGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCAAGGACTATTCAGATGTCTATTGAACTGGTGATGGATTTGAGGGTCATGGGTTTGGAATCTCCTTTGTTCCACACGCTGCATCACATAATGGACATGTCGGAGGAGGGTGCAGGGGACAAGACACACAATGCTCCGACACGGTCATACGTGCGGGACGCGAAAGCTGTGGCTGCAACACCCGCGGATGTGAAGGAATATCCGAATTCTTATGTGTTCCAGATCGACATGCCGGGTTTGAAATGTGGGGACATCAAGGTTCAGGTTGAAGATGATAACATGCTTTTGATCAGCGGAGAGAGAAAGAGGGAAGAAGAGAAAGATGGGGCAAAGTATCTCAGAATGGAAAGAAGGGTTGGAAAGTTCATGCGCAAGTTTGTGTTACCTGAAAATGCAAACACTGATGAAATCTCTGCAGTGTGTGAAGATGGTGTGCTAATTGTCACTGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCACGGACTATTGAAGTTAAGGTTGCTTGA 957 0.4713 MDFRVMGLESPLFHTLHRIMDTSDEGAGDKTHNAPTQTYVRDAKAMAATPADVKEYPNSYVFQIDMPGLKSGDIKVQIEDDNVLLISGERKREEEKEGVNFLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQMSIELVMDLRVMGLESPLFHTLHHIMDMSEEGAGDKTHNAPTRSYVRDAKAVAATPADVKEYPNSYVFQIDMPGLKCGDIKVQVEDDNMLLISGERKREEEKDGAKYLRMERRVGKFMRKFVLPENANTDEISAVCEDGVLIVTVQKLPPPEPKKPRTIEVKVA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00463 318 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
Phco2g00463 318 SUPERFAMILY HSP20-like chaperones 34 150 IPR008978 -
Phco2g00463 318 Gene3D - 6 156 IPR008978 -
Phco2g00463 318 Gene3D - 167 317 IPR008978 -
Phco2g00463 318 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
Phco2g00463 318 Pfam Hsp20/alpha crystallin family 212 316 IPR002068 -
Phco2g00463 318 Pfam Hsp20/alpha crystallin family 52 155 IPR002068 -
Phco2g00463 318 SUPERFAMILY HSP20-like chaperones 193 310 IPR008978 -
Phco2g00463 318 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 172 316 IPR031107 -
Phco2g00463 318 FunFam 17.3 kDa class II heat shock protein-like 171 317 - -
Phco2g00463 318 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 202 318 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00463 Phco-Chr2 4175437 4178252 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00463 2 4175437 4178252 Phco2g00463 2 4175437 4178252 ECH