Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00456 ATGGGTGAAGCTCCAGAAGAGTTCTACATTAATGGGTTCTCAAAGTTTGGGCACGAAACCCAACAACAAAACCATGTCAACGATCAGAACCATGATTCCTCTTGGTACGAAGAAATCATCGATGATGATCTCAAATGGTCTTTTAAACTAAACAGTGTGCTCCATAAAGCGATTAGTGAGTATCAGGACATAGCTCTCTTGGATACAAAGCGTTTTGGAAAGGCTTTGGTGCTTGATGGAAAAATGCAGAGTGCTGAAACGGACGAGTTTATTTATCATGAATGCTTGATTCACCCTCCTCTTTTGTGCCACCCTAATCCCAAGACTGTGTTTATAATGGGTGGAGGTGAAGGTTCTGCAGCAAGGGAAGCCCTTAAACACAGGTCAATGGACAGAGTGGTCATGTGTGATATAGACAAGGAAGTGGTGGATTTCTGCAAAAAATACTTGATTGCAAATAGTGAAGCATTTTCTAATAAGAAGCTCGACCTTGTCATCAGTGATGCCAAGGCTGAATTGGTGAAGAGAAAGGAGAGATTTGATATTATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGTTATCAACTCTACACCAAATCCTTCTATGAGAAGATACTGAAACCCAAGCTAAATGATAATGGCATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTTACACACAAAGAGGTCTTCACTTCTATATATAACACAATCAAACAGGTCTTCAAATATGTCATTGTATACACAACTCATGTACCATCATTTGCTGACACATGGGGATGGGTCATGGCTTCGGATCAACCACTTTCAATTTGTGCTGAAGAAATGGACAGAAGAATCGCAAAAAGGATAGATGGGGAACTTCTCTATCTAAATGGTGCTTGGTTCCATTCATCTACAACCATGAATAAAACTGTTTACCAATCTCTGCAGAATGAAACTCATGTGTACACGGAAGAAAATGCTAGATTTATTCCAGGTCATGGAATGGCTTTTCGCCTCTAA 1017 0.4071 MGEAPEEFYINGFSKFGHETQQQNHVNDQNHDSSWYEEIIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPPLLCHPNPKTVFIMGGGEGSAAREALKHRSMDRVVMCDIDKEVVDFCKKYLIANSEAFSNKKLDLVISDAKAELVKRKERFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVIVYTTHVPSFADTWGWVMASDQPLSICAEEMDRRIAKRIDGELLYLNGAWFHSSTTMNKTVYQSLQNETHVYTEENARFIPGHGMAFRL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00456 338 FunFam Polyamine aminopropyltransferase 86 333 - -
Phco2g00456 338 Hamap Polyamine aminopropyltransferase [speE]. 34 315 IPR001045 GO:0003824
Phco2g00456 338 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 33 270 IPR030374 -
Phco2g00456 338 CDD AdoMet_MTases 114 222 - -
Phco2g00456 338 Pfam Spermine/spermidine synthase domain 89 267 - -
Phco2g00456 338 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 26 325 - -
Phco2g00456 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 315 IPR029063 -
Phco2g00456 338 NCBIfam fused MFS/spermidine synthase 106 261 - -
Phco2g00456 338 Gene3D Spermidine synthase, tetramerisation domain 33 85 IPR037163 -
Phco2g00456 338 Gene3D Vaccinia Virus protein VP39 86 337 IPR029063 -
Phco2g00456 338 Pfam Spermidine synthase tetramerisation domain 35 86 IPR035246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00456 Phco-Chr2 4102191 4105905 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00456 2 4102191 4105905 Phco2g00456 2 4102191 4105905 ECH