Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00430 ATGACAAGTGTTGAGATACATGTGGCAGCACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAACATAATCCTCATGCAGCAACCTTTGGTGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAACTGGGTTCATCTGGACCATGCTATTGAGCCAAGTGAACAGTTTGACTTCAACGGTTGTTGGTCAGGCTCAGCCACTATAATCCCTGGCAAAGAACAGCCTGTTATTTTGTACACAGGAATTGATGATAAAAAACACCAAGTTCAAAACATAGCTATGCCAAAGAATCCATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTATCATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGCCATTGGTGCTCAAAATGGTGATGAAGGGAAGGTAGTTATTTACCAAAGTGAGGATTTTGCTAATTGGACAGTGGAATTGAATCCTCTTTTTGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCCATAGCACAAATGGGGTGGATACATCTGTTCAAAATCAAAGTGTTAGACATGTATTAAAGATAAGCTATCTACGGGTACATCAGGACTATTATTTTCTTGGTAAATATGCCAATGATGATGGAAACTTTATTCCTGATGTTAAATTCACAGGAACTAGTTTGGCCTTAAGGTTTGACTATGGTAAATTTTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAGCAGAAGGATATTATGGGGGTGGGTGGAGGAGTGTGACACTAGCCATGATGACATTGAGAAAGGATGGGCTGGTCTTCAGTGTATTCCAAGACAAGTTTGGCTTGATGAAAGTGGAAACAGGCTAATGCAATGGCCAATTGAAGAGATAAAAAAACTACATGACAAACACATTAGCATAGTGGGAGAGAAACTGGTTGGTGGATCAATTCTTGAAATCTCAGGTATCACTGCATCACAGGCTGATGTAGAAGTGTTGTTTGAGCTACCGGAACTAGAGAATGCAGAGTGGCTAGATGAAAGTGAAGTTGATCCTCGGTCTTCATTGAGGCAGGACTTTGATAAAACCTCAGATGGAACTATCTTTGACATAGACCCCAATCAAAAAACAATTTCACTCAGAAGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGAGAGAAAGGGAGAATTTGTATTACCAGTAGAGTTTATCCCTTGTTGGCTATTGACAAAGATGCTCATCTTTATGTATTCAACAATGGAAGGCAGAGTGTGGTGATCTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGGCCAAGAGGAAAGCATAAATAAGCAGTAG 1422 0.4065 MTSVEIHVAAPMYYKGVYHFFYQHNPHAATFGEKMVWAHSVSYDLINWVHLDHAIEPSEQFDFNGCWSGSATIIPGKEQPVILYTGIDDKKHQVQNIAMPKNPSDPFLREWVKHPQNPIMTPPSGVEVDNFRDPSTAWQGKDGKWRVAIGAQNGDEGKVVIYQSEDFANWTVELNPLFASDNTGVCECPDFFPVSIHSTNGVDTSVQNQSVRHVLKISYLRVHQDYYFLGKYANDDGNFIPDVKFTGTSLALRFDYGKFYASKSFFDHAKSRRILWGWVEECDTSHDDIEKGWAGLQCIPRQVWLDESGNRLMQWPIEEIKKLHDKHISIVGEKLVGGSILEISGITASQADVEVLFELPELENAEWLDESEVDPRSSLRQDFDKTSDGTIFDIDPNQKTISLRSLIDRSIIESFGEKGRICITSRVYPLLAIDKDAHLYVFNNGRQSVVISELNAWSMKHAEFGQEESINKQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00430 473 SMART glyco_32 7 419 IPR001362 GO:0004553|GO:0005975
Phco2g00430 473 SUPERFAMILY Arabinanase/levansucrase/invertase 10 317 IPR023296 -
Phco2g00430 473 SUPERFAMILY Concanavalin A-like lectins/glucanases 316 461 IPR013320 -
Phco2g00430 473 Gene3D Glycosyl hydrolase domain; family 43 8 328 IPR023296 -
Phco2g00430 473 Gene3D - 329 375 - -
Phco2g00430 473 Gene3D - 376 459 - -
Phco2g00430 473 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 9 370 - -
Phco2g00430 473 CDD GH32_Fruct1-like 10 305 - -
Phco2g00430 473 Pfam Glycosyl hydrolases family 32 N-terminal domain 10 316 IPR013148 -
Phco2g00430 473 Pfam Glycosyl hydrolases family 32 C terminal 381 458 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00430 Phco-Chr2 3726420 3728402 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00430 2 3726420 3728402 Phco2g00430 2 3726420 3728402 ECH