Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00429 ATGGAGACCAAGGCATCACTTGACAGCACCAATTCAAACAAGTACATGGTACCTGAAAAACAGCCTTACCGAACCTGGTACCACTTTCAGCCCCCACAAAATTGGATGAATGGACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAATTCAACCCTTATGCACCAACCTTTGGTAGGCATATGGTATGGGGTCATTCAGTATCCTATGATCTCATCAATTGGATTCATCTAAATCATGCTCTTGAACCAAGTGAGTCCTATGACATTAATGGCTGCTACTCTGGCTCAATCACAATCCTCCCTGGCGAAAAACCTATCATTATGTATACAGGCAGTGATTCTAACAAACATCAAGTTCAGAACTTGGCTGTGCCAAAGAATCTATCAGACACCTTCTTAAGGGAATGGGAGAAACACCCTCAAAACCCTATCTTGATTTCACCTAGTGAAGTTGAAGTGGATGGTTTTAGAGATCCTACAACTGCTTGGCAAGGAAGTGATGGCAAATGGAGAGTGATTATTGGTGCCAAAAATGGTGATGAAGGGAAGGCTCTTCTCTACCACAGTGAGGATTTCGTTAATTGGAAACTGTTTCCTAATCCTATGTATGCATCAGAAAATACTGGGATGTTTGAGTGTCCAGATTTTTTTCCTGTGTACATCAGTGGCACGAAGAATGGGGTGGATACATCTGTCCAAAACAGCGGTGTTAAGCATGTCTTGAAAACGAGCTATCAGAACAAACAACTAGAATACTATTTTGTAGGTGACTATTTCCTTGATCAGGAAAAGTTTGTTCCTGATGATGATTTGGGAGGACCTAATCTGAACTTAATATTGGACCATGGAAGGTTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAACAGAAGGATATTGTGGGGATGGTCAGAGGAGTGTGACACCACACAAGATGATTATGAGAAAGGATGGGCTGGTCTACAGAGCATTCCAAGGCAAGTTTGGCTTGATGCAAGTGGGAAGATGTTGATGCAGTGGCCAATTGAAGAGGTAGAAAAACTACGTGACAAACAAATTAGCATAAAGGGTGAGAAACTGGCTGGTGGATCAATTCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTTCCAGAACTAGAGAATGCAGAGTTTCTAGATGAAAGTGAAGTTGATCCTCACTTATTGTCTTCATTGCGGCAGAACCTTGATAAATCCTCATATAGAACCATCTTTGACATAGACCCCAAGCAAAAAACAATTTCACTCAGATGCTTGATTGATCGTTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATAACCAGTAGAGTTTATCCCTTGTTGGCTATAGACAAAGATGCACATCTTCATGTATTCAACAATGGAAGACAGAGTGTGGTGATCTCAGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGCCAAGAACAAAGGATAAAATAA 1506 0.4097 METKASLDSTNSNKYMVPEKQPYRTWYHFQPPQNWMNGPMYYKGVYHFFYQFNPYAPTFGRHMVWGHSVSYDLINWIHLNHALEPSESYDINGCYSGSITILPGEKPIIMYTGSDSNKHQVQNLAVPKNLSDTFLREWEKHPQNPILISPSEVEVDGFRDPTTAWQGSDGKWRVIIGAKNGDEGKALLYHSEDFVNWKLFPNPMYASENTGMFECPDFFPVYISGTKNGVDTSVQNSGVKHVLKTSYQNKQLEYYFVGDYFLDQEKFVPDDDLGGPNLNLILDHGRFYASKSFFDYAKNRRILWGWSEECDTTQDDYEKGWAGLQSIPRQVWLDASGKMLMQWPIEEVEKLRDKQISIKGEKLAGGSILEVSGITASQADVEVLFELPELENAEFLDESEVDPHLLSSLRQNLDKSSYRTIFDIDPKQKTISLRCLIDRSIIESFGEKGRICITSRVYPLLAIDKDAHLHVFNNGRQSVVISELNAWSMKQAEFGQEQRIK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00429 501 Pfam Glycosyl hydrolases family 32 C terminal 415 488 IPR013189 -
Phco2g00429 501 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 407 493 - -
Phco2g00429 501 Pfam Glycosyl hydrolases family 32 N-terminal domain 28 344 IPR013148 -
Phco2g00429 501 Gene3D - 357 406 - -
Phco2g00429 501 Gene3D Glycosyl hydrolase domain; family 43 33 356 IPR023296 -
Phco2g00429 501 SMART glyco_32 28 449 IPR001362 GO:0004553|GO:0005975
Phco2g00429 501 SUPERFAMILY Concanavalin A-like lectins/glucanases 344 491 IPR013320 -
Phco2g00429 501 Gene3D - 407 489 - -
Phco2g00429 501 SUPERFAMILY Arabinanase/levansucrase/invertase 20 345 IPR023296 -
Phco2g00429 501 CDD GH32_Fruct1-like 34 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00429 Phco-Chr2 3721858 3724570 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00429 2 3721858 3724570 Phco2g00429 2 3721858 3724570 ECH