Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00425 ATGGACGAAGAAGAGAGTGTTACAAAAACCGCATTCTCTTCATTCATTCATTCATTCACTCACTCTGCTCTCACTATCATGGACCCTCCCGCAACCTACATTTCCTCCTCCGACCTTCGCACCCACAACACGCCCCACGACGCTTGGATCTCAATCCACGGCAAAATCTACGATGTCTCCTCCTGGCTCCACCGCCACCCAGGCGGCACCCTCCCGCTTCTCACCGTCGCCGGCACAGACGCCACCGACGCCTTCCTCGCCTTCCACCCGCCCTCCGCCGCTGCCCTCCTCCCCACATTCTCCACTGGCATCCTCCTCTCCGACTACGCCGTCTCCCCCGCCTCCTCAGACTACCGCCAGCTCCTCTCCCAGCTCTCCGATCTCAAGCTCTTCGAACGCAAGGGCCACACCACCCTCATCTTGCTCTCCATCATCCTCACCCTCCTCCCTCTCTGCGTCTGCGGCGTCGTCTTCTCCGACAGCACGTGCGTGCACTTGCTCTCCGCCGCCTTGATCGGATTCCTCTGGATTCAAAGCGGCTGGATTGGCCATGACTCGGGTCATTACAACGTCATGCTCAACCGCCGCTTCAACCGCGTCGCGCAGATCCTTTCCGGCAACGTTCTCGCCGGAATCAGCATTGCCTGGTGGAAGTGGAACCACAATGCGCACCACATTGCGTGCAACAGCCTCGACTTCGACCCCGATCTTCAGCACCTGCCCTTCTTCGTCGTCTCCTCGAGGTTCTTCAACTCCCTCACTTCCAAATTCTACGATAGAAAGCTTATTTTCGATTCCCTCGCTAGGTTTTTGGTCAGTTACCAGCACTGGACTTACTACCCTGTCATGTGCTTCGCAAGGATTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTCTCCAAGAGAAAGGTGGAGCACAGAGGAGTTGAGCTTTTAGGGTTGCTTACGTTTTGGGTTTGGTACCCTTTGTTGGTCTCCTTCTTGCCTAATTGGTGGGAGAGGGTTTTGTTCGTTGTGACAAGCTTTTCTGTGACGGGTATTCAGCATGTGCAGTTCTGCTTAAACCATTTCTCTTCAAAAGTTTACCTTGGTCCTCCAAATGGTGATGATTGGTTTGAGAAGCAGACTAATGGAACTCTTGATGTGAACTGTTCTGCTTGGATGGACTGGTTTCATGGTGGCCTGCAGTTTCAGGTGGAGCACCATTTGTTTCCCCGGCTCCCGCGCTGCCATCTGAGGAAGATCGCGCCCTTGGTTAAGGATCTTTGCAAGAAGCATAACCTTCCTTACAATTGTGTGTCCTTTTGGAAGGCCAATGTGCTGACGATTCAGACACTGCGAAAGGCGGCGTTGCAGGCCAGGGATGGATCTGGGCCGGTTCCCAAGAATTTGGTTTGGGAGGCTGTTAATACCCATGGATGA 1422 0.5366 MDEEESVTKTAFSSFIHSFTHSALTIMDPPATYISSSDLRTHNTPHDAWISIHGKIYDVSSWLHRHPGGTLPLLTVAGTDATDAFLAFHPPSAAALLPTFSTGILLSDYAVSPASSDYRQLLSQLSDLKLFERKGHTTLILLSIILTLLPLCVCGVVFSDSTCVHLLSAALIGFLWIQSGWIGHDSGHYNVMLNRRFNRVAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFNSLTSKFYDRKLIFDSLARFLVSYQHWTYYPVMCFARINLFAQSFFLLFSKRKVEHRGVELLGLLTFWVWYPLLVSFLPNWWERVLFVVTSFSVTGIQHVQFCLNHFSSKVYLGPPNGDDWFEKQTNGTLDVNCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRKAALQARDGSGPVPKNLVWEAVNTHG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00425 473 CDD Delta6-FADS-like 166 428 - -
Phco2g00425 473 PANTHER FATTY ACID DESATURASE 2 31 454 IPR012171 GO:0016491
Phco2g00425 473 PIRSF FA_sphingolip_des 3 460 IPR012171 GO:0016491
Phco2g00425 473 SMART Cyt_b5_2 34 106 IPR001199 -
Phco2g00425 473 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 31 106 IPR001199 -
Phco2g00425 473 Pfam Fatty acid desaturase 165 432 IPR005804 GO:0006629
Phco2g00425 473 PRINTS Cytochrome B5 signature 93 105 IPR001199 -
Phco2g00425 473 PRINTS Cytochrome B5 signature 56 66 IPR001199 -
Phco2g00425 473 PRINTS Cytochrome B5 signature 66 80 IPR001199 -
Phco2g00425 473 Pfam Cytochrome b5-like Heme/Steroid binding domain 36 98 IPR001199 -
Phco2g00425 473 Gene3D - 31 113 IPR036400 -
Phco2g00425 473 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 29 107 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00425 Phco-Chr2 3671798 3675742 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00425 2 3671798 3675742 Phco2g00425 2 3671798 3675742 ECH