Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00405 ATGCTATGGGTAAAAAAGGTGTATTTCTGGATAATTCGAGTTATCTCACATTCCATTTTCGGTGCATGCATGAAATTGGTCAACCGAGTGTCCGAGTTTAGCAAGGTGAGTGAGTTAGGTTTCGACGATTCTCGAATTTTTATCTCGGAAACCGTTACTGAGTGGACTCGTTGTTTCGTTGGCTCGGCCAATTTGCATAAGAACATCTCCGATTCTTCACCACCGCCATTGCTATCGCTGTCGATGTCATCTTCTTCCGCGAACGACACCGAGGCTCTCCGCCGCAATCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCTCCGTCCAAGGTTCCGCTAATCTACTCCGAATCCTACGACATAGCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAAAATGCATCGTTGAGCCTCTGGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACACAGAATTGTATCTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTCCCCATTCAGGAAGCAGGTTGGAGGAACTGTACTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTTGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGCTTATGCAGATATTTCACTTTGCATCCACTTTGCTTTTGCTCAGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTATGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATATATCCTTTGGATTACGAGGCGAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACGCTTACAGAAGAGTACCTTCAAAAATTAGATGAAGCACTAGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACCGACATCCTAGAAGGAGATCCATTAGGAAGGTTGGAGATCAGTCCTGAAGGAATTGCCCTTAGAGATGAAAAAGTTTTCAGGTTTGCTCGTGAGAGAAACATTCCCATCGTCATGCTCACTTCAGGTGGTTACATGAAATCTAGTGCCAGAGTGATTGCAGATTCAATAGTCAATCTTTCCAAGAAATGCTTGATAGAAACCAGTGGAGCTCCAAAGTCTTCGTGA 1290 0.4411 MLWVKKVYFWIIRVISHSIFGACMKLVNRVSEFSKVSELGFDDSRIFISETVTEWTRCFVGSANLHKNISDSSPPPLLSLSMSSSSANDTEALRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGILDKKCIVEPLEASKDDLLVVHTELYLNSLKESSKVAMIVEVPPVALIPNCLVQQKVLSPFRKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFAQLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILEGDPLGRLEISPEGIALRDEKVFRFARERNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIETSGAPKSS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00405 429 PRINTS Histone deacetylase superfamily signature 269 284 IPR000286 -
Phco2g00405 429 PRINTS Histone deacetylase superfamily signature 346 356 IPR000286 -
Phco2g00405 429 PRINTS Histone deacetylase superfamily signature 235 258 IPR000286 -
Phco2g00405 429 CDD HDAC_classIV 131 414 IPR044150 GO:0004407|GO:0016575
Phco2g00405 429 FunFam Histone deacetylase 11 112 421 - -
Phco2g00405 429 Pfam Histone deacetylase domain 131 412 IPR023801 -
Phco2g00405 429 Gene3D Histone deacetylase domain 111 425 IPR037138 -
Phco2g00405 429 PANTHER HISTONE DEACETYLASE 2-RELATED 120 414 - -
Phco2g00405 429 SUPERFAMILY Arginase/deacetylase 109 414 IPR023696 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00405 2 3502601 3509167 Phco2g00405 2 3502601 3509167 ECH