Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00395 ATGGCCACCACTACCACTTATCTTTTCACTCTCCTCCTTCTCTTCCTTGTCGCTCTCGTCTCTGCTCGCCGTGACCTCGTTGGAGACTTCCTCCGACTGCCGTCTGATTCCGGTAACGACGACACCGTCCAGGGAACGCGCTGGGCCATCCTCATCGCTGGTTCGAACGGCTTTTGGAATTACAGACATCAGGCCGATATTTGTCATGCCTATCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAATATCATTGTTTTTATGTATGACGACATTGCATTCAATTCGGAAAATCCAAGGCCTGGAGTCATCATTAACAAACCAGATGGAGATGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGTGAAGATGTTACTGCTCATAACTTTTATGCTGCTTTACTTGGAGATAAGTCGGCACTTACTGGTGGCAGTGGGAAAGTTGTGAATAGTGGGCCCAATGATCGCATATTTATATTCTACTCTGATCATGGCGGTCCAGGGGTGCTCGGGACGCCTGCTGGTCCTTACATATATGCATCTGATCTGATTGAAGTATTGAAGAAAAAGCATGCTTCTGGAACGTATAAAAACCTAGTATTTTATTTGGAGGCATGTGAATCTGGAAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATTTATGCAACAACAGCTTCGAATGCCGATGAAAGTAGTTGGGGAACATATTGTCCTGGGGAGTATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGATAGACACGATTTGCGAACAGAATCTTTGCACCAACAATATAAAGTGGTTAAAGAGAGGACTCTATATGGAGGTTCATACTATGGCTCTCACGTGATGCAGTATGGTGATATAGGGCTTAGCAAGGATCTTCTCTTCCTGTATTTGGGTTCAGATCCTGCAAATGATAATTTGACTTTCGTGGATGAAAACTCCTTACAGTCATCTTCTAAAGCAGTCAACCAAAGGGATGCTGATCTCGTCCATTTTTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTCCTAAGAAAAATGAAGCTCGGAAAAAAGTTCTGGAAGTAATGTCTCACAGAATGCATATAGACGACAGTGTGGAACTTGTTGGAAAGCTTTTATTTGGCATTGAAAAGGCTCCTGAATTACTGAGTGCTGTAAGACCGGCTGGATCGGCACTTGTTGATGACTGGGACTGCCTGAAAACCATGGTAAGGACTTTTGAGAAACATTGTGGATCCTTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCGAACATCTGCAATGCAGGAATAAAGAAGGAGCAAATGGGTGAAGCCTCAGCACAAGCTTGTGTCACTATTCCTGCCAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCGTAA 1449 0.4431 MATTTTYLFTLLLLFLVALVSARRDLVGDFLRLPSDSGNDDTVQGTRWAILIAGSNGFWNYRHQADICHAYQILRKGGLKEENIIVFMYDDIAFNSENPRPGVIINKPDGDDVYEGVPKDYTGEDVTAHNFYAALLGDKSALTGGSGKVVNSGPNDRIFIFYSDHGGPGVLGTPAGPYIYASDLIEVLKKKHASGTYKNLVFYLEACESGSIFEGLLPEDINIYATTASNADESSWGTYCPGEYPSPPPEYSTCLGDLYSVAWMEDSDRHDLRTESLHQQYKVVKERTLYGGSYYGSHVMQYGDIGLSKDLLFLYLGSDPANDNLTFVDENSLQSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKKVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLSAVRPAGSALVDDWDCLKTMVRTFEKHCGSLSQYGMKHMRSFANICNAGIKKEQMGEASAQACVTIPANPWSSLQRGFSA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00395 482 PANTHER HEMOGLOBINASE FAMILY MEMBER 10 466 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 PIRSF Legumain 1 482 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 FunFam Vacuolar-processing enzyme beta-isozyme 45 341 - -
Phco2g00395 482 Pfam Peptidase C13 family 47 316 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 Gene3D - 342 470 IPR046427 -
Phco2g00395 482 Gene3D - 45 341 - -
Phco2g00395 482 PIRSF AE 1 482 IPR043577 GO:0004197|GO:0051603
Phco2g00395 482 PRINTS Hemoglobinase (C13) cysteine protease signature 48 72 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 PRINTS Hemoglobinase (C13) cysteine protease signature 197 213 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 PRINTS Hemoglobinase (C13) cysteine protease signature 73 102 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 PRINTS Hemoglobinase (C13) cysteine protease signature 120 135 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 PRINTS Hemoglobinase (C13) cysteine protease signature 148 167 IPR001096 GO:0006508|GO:0008233
Phco2g00395 482 CDD legumain_C 344 465 - -
Phco2g00395 482 FunFam Vacuolar-processing enzyme beta-isozyme 342 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00395 Phco-Chr2 3409423 3415524 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00395 2 3409423 3415524 Phco2g00395 2 3409423 3415524 ECH
Phco2g00395 2 3409423 3415524 Phco7g00567 7 4263292 4266463 PCT