Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00387 ATGGCTTCTTCTTCACCTCCTTCTCCCTCTTTTCTCACACACCTTCCTCTTCCTCTCCCTCTTCATCCTCCTTCTTCCTCTCACCAAGGTGAGAAGCGCGTGAACGAAGATGAATCGCGCGTTCCGATTCACATCGTGACGGAGGCGTCGCAACTTCCCGCCGACTTCCTGGAACCCTCGCCTCAAGCGGAGCTCGTCATTGGCTTTGACTGCGAGGGTGTTGACTTGTGTCGCAAAGGCACTCTCTGCATAATGCAGCTTGCATTTCCTGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAAGAGCTTATCAAAGCGTGTAAGCTTGCACTTGAATCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGCGAGGCACTCTTCTTTCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACTCAGATTGCTTATTCACTAATAGAGGATCAAGAAGGACGAACGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCATATCATATGTTGAGAAGGAAGAAGTTCGTGACCTCCTACGACAGGACCCTGAGTTTTGGACTCACAGACCATTATCTGAACTAATGGTCCGTGCTGCTGCTGATGATGTTCGTTTCCTTCTCTACATTTATCACCAAATGATGGAGAAGTTAAATGAGCGGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGATGTTTCTGTTTGAACAGTAACAATTTTGCTGATTGGCCATCGCTACCTTCGATTCCAGATAGCCTGAATGCTGATGATAATGGTCCCGAGGAAGAAATTCTTTCAGTTCTTGATGTTCCCCCAGGAAAGATGGGACGTGTTATTGGGAAAAGAGGGGCGACAATTTTGTCAATTAAGGCTGCTTGCAATGCGGAAATTCACACCGGAGGTCCCAAGGGCCCACCTGACAAGGTCTTTATCATCGGACCAGTGAAGGAAGTGAGGAAAGCCGAGGCCATGTTTCGAGGTAGAATCTTGGATATGTAG 1050 0.4695 MASSSPPSPSFLTHLPLPLPLHPPSSSHQGEKRVNEDESRVPIHIVTEASQLPADFLEPSPQAELVIGFDCEGVDLCRKGTLCIMQLAFPDAVYLVDAIEGGEELIKACKLALESNYITKVIHDCKRDSEALFFQFGIKLNNVVDTQIAYSLIEDQEGRTRLRDDYISFVGLLADPRYCGISYVEKEEVRDLLRQDPEFWTHRPLSELMVRAAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCLNSNNFADWPSLPSIPDSLNADDNGPEEEILSVLDVPPGKMGRVIGKRGATILSIKAACNAEIHTGGPKGPPDKVFIIGPVKEVRKAEAMFRGRILDM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00387 349 Gene3D K Homology domain, type 1 269 346 IPR036612 GO:0003723
Phco2g00387 349 SMART kh_6 279 347 IPR004087 GO:0003676
Phco2g00387 349 CDD KH-I 284 341 - -
Phco2g00387 349 ProSiteProfiles Type-1 KH domain profile. 280 342 - -
Phco2g00387 349 PANTHER EGALITARIAN, ISOFORM B 35 347 - -
Phco2g00387 349 Pfam KH domain 285 342 IPR004088 GO:0003723
Phco2g00387 349 CDD Egl_like_exo 55 251 - -
Phco2g00387 349 SUPERFAMILY Ribonuclease H-like 32 253 IPR012337 -
Phco2g00387 349 MobiDBLite consensus disorder prediction 1 38 - -
Phco2g00387 349 Gene3D - 14 248 IPR036397 GO:0003676
Phco2g00387 349 Pfam 3'-5' exonuclease 50 231 IPR002562 GO:0003676|GO:0006139|GO:0008408
Phco2g00387 349 SMART 35exoneu6 43 232 IPR002562 GO:0003676|GO:0006139|GO:0008408
Phco2g00387 349 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 277 346 IPR036612 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00387 2 3339487 3344282 Phco2g00387 2 3339487 3344282 ECH