Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00306 ATGGCAACAGCCTCAGAGAACAACACCAACACCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCCATATGCCAACTGCACGGGAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTAACTAATGTCACAGACGCCGCTGCTGCAGTTGCCGTTTCAGATATTCAAAAACAGAAAAAAATCAAACTCCAGAAACCCGTGGTGACGGTTTCAACGCCGGAGAATGTCGACGAGAGAAGCGACCCGCAACTGTGTGGGCCTTATGTTTCTGATATATACGAGTACCTTTGCGGAATGGAGGTTCTTCCTTGTAAGAGACCGTTACCTGATTATATCCAGAAAGTTCAGAAGGACGTGAATGCTAATATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCGGAAGAGTATAAACTGGTGTCTGATACATTATATTTTTGCGTGGCTTATATAGATAGATTTTTATCTTTGAATGTATTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTATCGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCCAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAAGTTTGAATTGGGTGGTCCAACAGTGAAGACATTCTTGAGGAGGTTCTGTAGAGTTGGTCAGGAGGGCATTGATGCTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTACCTTGCCGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTGTGCCATCTTTGGTGGCAGCTTCTGTTGTATTCTTAACAAGATATATGTTAAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCCGACTTCAAGGAATGTGTTCTAAACATACATGATTTATACCTCAGTAGGAGGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAGTACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCCCTTTCTTTTTTTGAATTTTCAGGATCAGATTGTTAG 1092 0.4423 MATASENNTNTTRPQREAKKRAAAAICQLHGNAKKKRVVLGDLTNVTDAAAAVAVSDIQKQKKIKLQKPVVTVSTPENVDERSDPQLCGPYVSDIYEYLCGMEVLPCKRPLPDYIQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSLNVLSRQRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFCRVGQEGIDASDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLTRYMLSTKTHPWNSALHQLTRYKPADFKECVLNIHDLYLSRRGPSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFSGSDC 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00306 363 Gene3D - 94 344 - -
Phco2g00306 363 MobiDBLite consensus disorder prediction 1 20 - -
Phco2g00306 363 CDD CYCLIN_AtCycA_like_rpt1 84 221 - -
Phco2g00306 363 Pfam Cyclin, C-terminal domain 225 347 IPR004367 -
Phco2g00306 363 Gene3D - 110 223 - -
Phco2g00306 363 SUPERFAMILY Cyclin-like 83 222 IPR036915 -
Phco2g00306 363 PIRSF Cyclin_A_B_D_E 1 353 IPR046965 GO:0016538|GO:0044772
Phco2g00306 363 FunFam Cyclin A1 212 344 - -
Phco2g00306 363 CDD CYCLIN_AtCycA-like_rpt2 225 339 - -
Phco2g00306 363 SMART Cyclin_C_2 225 348 IPR004367 -
Phco2g00306 363 PANTHER CYCLINS 59 342 IPR039361 -
Phco2g00306 363 Pfam Cyclin, N-terminal domain 94 222 IPR006671 -
Phco2g00306 363 ProSitePatterns Cyclins signature. 127 158 IPR006671 -
Phco2g00306 363 FunFam Mitotic cyclin 6 110 210 - -
Phco2g00306 363 SUPERFAMILY Cyclin-like 225 350 IPR036915 -
Phco2g00306 363 SMART cyclin_7 229 317 IPR013763 -
Phco2g00306 363 SMART cyclin_7 132 216 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00306 Phco-Chr2 2497486 2501129 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00306 2 2497486 2501129 Phco2g00306 2 2497486 2501129 ECH
Phco2g00306 2 2497486 2501129 Phco7g00498 7 3659458 3661131 PCT