Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g02017 ATGAAGACTCTTCTTCATTCCTTGCCATCCATGTCCAACTTTTCCTCCAACCAGATTCGCTTTCTCCTCACCACCTTGAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTCTCTCAGTTTGCTGAATTTGGAACCACTGGATGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGGTTATGCCAGGAGAGATACGAAAGACATGCAGCATGAGCCAATTCTTGGGGCAGTCATTAAATACCTCTTGGACAAACCAAACTTCAGTACAGTGTTTTCTGAGTCCATGAAGAATATGGAAATTAATGAAAGCTTTCTAGAAAATTTTTGTAATGGATTGCAGTTATCTTTATTGGAAAAGATGGTCATCAGTCTTGCTTTATCTGATTCTGAGAATCCTGATGTCAGGCTGTGTGGAAAAAACTTTTGCATGTCTCAGATCGAGGAATTGTGTGCCAACCCTGGTTCTATGAGTTTTCATGAGCAAATTCACAGTATTATCATGTTCCTAAAGCAGTCCGAGGGTCTTTCCAAGCACGTGGATTCCTTTATGCAGATATTATCACTTGTGGAGTTCAAAGACGCACCACCTTTCGTATTGACTCCATTGCTTCCTGATGAGATGCACGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCACGACTCTGGAGAAAATGATTTTGATACTATTTTGGCAGACATACAGAAGGAAATGAACATGGGTGATATTGTGAAGGAGCTAGGCTATGGATGCACTGTTGATGTTTCACAGTGCAAGGATATATTTTCACTCTTCTTACCTTTAACTGAACATACACTCTCTAAATTACTTGGTGCCATTGCTTGTACCCATACTGGGTTGGAGGACAATCAAAACACATACTTAAATTTTCGTGCGGCCCATGGATACAACGTGTCTGAGTTGCCGCCGCTGAACTCTTGGAATATTGATGTCTTGATTGATACAGTCAAGCATCTTGCACCTCATACCAATTGGGTACGTGTTATTGAAAATCTTGATCATGAAGGGTTTTTCCTTCCTAGTGAAGATGCATTCTCTTTTCTCATGTCTGTTTATAAACAGGCCTGTAAGGAACCGTTTCCTCTCCATGCCATCTGTGGGTCTGTCTGGAAGAATACCGAGGGTCAATTGTCTTTCCTTAAATATGCTGTATCAGCAGCACCGGAAATGTTTACCTTTGCACACTCTGGAAGACAGCTGGTATATGCTGATGCAATTAATGGCCACAAGCTTCAAAATGGACATCCGAATCATTCATGGCTGTGTCTTGACCTTGTAGATGTCCTCTGCCAGCTAGCTGAGAAAGGTCATGCCAGTGTTGTTCGATCAATCCTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTGCTTCTTGGGATGGCACACATTAATACGGCCTACAATCTCTTGCAGCAGGAAGTATCTCTAATTGTTTTTCCCATGATTATAAAAAGTGCGGTAGGCAGTGGGATGATTCTACACCTTTGGCATGTAAATCCTAACTTGGTCTTTAGAGGGATAATTGATTCTCAAAACCATGACACAGACAGTATTATAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTTTATCAACTGTGGTGGAAATTATTCCTTCTCATTATAGTATAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTACTTGACTTTGAGAAGTGGTTGAGTAGCAACTTAATTACATACAAGGAAACCTTTTTTGAGGAGTGTCTCAAGTTCTTGAAGGATGCCCATTTTGGTGGATCACAGAACCTTTCTGGCCAATCTTTTCATCCATCTAGTGCTGTTCTGAGTCTATATGCTGAGACAGCTGCTACTGTCTTGAAGGTTCTTAAATCTCATAATGACTTGGTTGCCCCTAGACATCTTTCTGAGGAGTTGGAGAGGCTGCATATATCTATTATAGATTCAAATCCAAGGATTCAGAATGGTGGAGCAGCTGATTCATCTACTTCTGATGGATATGCAGATGACATTGAAGCAGAAGCAAACTCTTACTTCCATCAAATGTTCTCTGATCAGTTAACCATTAATGCAATGGTACAAATGCTTGCTAGATTCAAGGAATCTTCAGTGAAGAGGGAGAAATCGATTTTTGATTGCATGACTGCAAACTTATTTGAGGAGTATAGGTTTTTTCCAAAGTATCCTGAAAGGCAACTCAAAATAGCTGCAGTTCTCTTTGGTTCCGTGATCAAGCATCAGCTTGTAACTCATCTGTCTTTGGGGATTGCACTGCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCAAAAATGTTTTTGTTTGGAAGTCTGGCGTTGGAGCAGTTTGTGGATCGGCTAATTGAGTGGCCTCAGTATTGCAATCATATTCTTCAAATTTCCCATTTGCGCAGTACACATTCAGAAATAGTTGCTTTCATTGAGCAGGCCCTTGCTAGGATTTCCTCTGGTCATTCGGATAGTGATGGAGCAAGTCATGCTTCTGTTATTAGTAACCATCATTCTGCACAGGCTACACTAGGGCATGTAGAGCAGCTCAGTGGCTCCACGGTCATACAACCTGGGCAGCAACATTTGTCACTGCAACTTCAACAGAGACGTGAAAATCTCTTGGATGATCGTCACAAAGCTTCTCTTGGTTCATCTACTGATGTAAAACCACAGTTATCTTCTCTAGGGCAATCGTCAGTACTAACACCTACTGATGCTTCTAATACCAATAAGTTACATAGCTCAGTCAGCACCTCGTCAATGCTATCTTCTTCTCCTGGTTTTGTTCGCCCTTCCCGTGTCCCTACTTCTACCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCCGCTGCTGAGAAAAGAGAAATTCCTATTGAGGCTCCAGGGTCAGAAGTTCAGGACAAGATATTATTTATAATTAATAATGTTTCTGCTGCTAATATTGAAGCTAAAGCAAAAGAGTTCACTGAAATTTTGAAAGAACAGTACTATCCTTGGTTTGCGCAGTATATGGTTATGAAAAGAGCAAGCATTGAACCAAATTTCCATGACCTGTACCTGAAATTCCTGGACAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTTCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCTGAACTCATAAAATCAAGTTCAGAGGAACGCTCTTTGCTTAAAAATTTGGGGAGCTGGCTTGGAAAGTTAACAATTGGCCGGAATCAGGTTTTGAGGGCTCGTGAAATAGACCCAAAGTCTTTGATTATGGAGGCATATGAGAAGGGGCTAATGATTGCTGTTATTCCATTTACGTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATACCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGTTGAAATTTATTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAATCTTGGTGTTGATATGAAGGATGTCACCCCAACTTCTCTCCTGAAGGATCGAAAAAGAGAATTTGAAGGAAATCCTGATTTCTCTAATAAAGATGTTGGAGCATCTCAATCACAAATGATTACTGACATAAAATCTGGTCTTGTACCTCCAGTAAATCAAGTGGAATTGCCACTTGAAGTCACCAATCAATCGAATACGGGTGCTCATCCACATATGCTGTCTCAGTATGCTGGTCCTCTTCATATGTCTTCGGGTGCATTGATGGAAGATGAAAAGGTAACACCTTTGGGATTGTCTGATCAACTTCCCTCTGCTCAAGGACTGTTACAAGCTACTCCTGCCCCAGCACCATTTTCTATTAGCCAGCTTCCAACACAGATACCTAACATTGGGACTCATGTTATTATTAATCAAAAGCTCAGTGGTTTTGGCTTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGATAGAGCTATCAAAGAGATAGTGTCTAGTATTGTGCAGCGTAGTGTTTCCATAGCAACACAAACTACAAAGGAGCTTGTTTTAAAGGATTATGCCATGGAATCTGATGAGACACGCATATTAAATGCAGCACACTTAATGGTCGCTAGTCTTGCTGGGAGTTTGGCTCATGTTACTTGCAAAGAGCCATTACGGGCATCGATCTCTGGTCAACTGAGGACTTCACTTCAGAACCTAAATATTGCTAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTAGATCTAGGCTGTGCTGTCATTGAACAGGCTGCTACTGATAAGGCAATAAACACCATCGATACAGAGATTGGTCAACAACTCTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAATTTGTATCCACAAGGTTCTATGGGTGGTGTTCCAGAGCCTCTTCGCCCCAAGCCTGGCCAGTTGTCGCTCTCACAACAGCGTGTATATGAGGACTTTGTTCGGCTTCCATGGCAAAACCAGTCTAGCCAGAGCTCACATTCTATGTCTGCTGGTGTTGCTGTTCAATCTGGCAATACTGGTCTTCCTAGCACGAATGGTTCTGTCTCTGGTCAGGTTAACCCTGGTTACCCTGTGAGTACAGGATATGAAGGAGTATCTCGACCATTAGAAGATATGGCAGAGTCTAACTTAGCTCCACATTTTAGTGCTTCCTCAATTCACATTAGAGCATCTGATAGTGCTTCCCAGCTTAGTTTGGAGAAAGAGTCTGTTGCCTCATTTCCCTCAGCTGCTTCCACACCTGAATTGCATGCAGTGGATTCATCTGATGTGAAAGAATCTGGAACTTCTTCACAGACACTAGTCACATCAGGTGCTATGGAGCGCCTTGGAAGTAGTTTCTTGGAGCCTTCTCTCACTACAAGAGATGCCCTAGATAAATTCCAAATTGTTGCACATAAGTTGGAAGCTATGGTCAGCAATGATTCCAGGGATGCAGAAATCCAGGGTGTCATCTCTGAGGTTCCAGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCTCAAAAGGTTTTCAAGGGTTTATACGATAATGCATCAAACAATATCCATGTCTCTGCCCATCTTGCAATCTTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTGAAGGAGCTTACTAGTTGGGTAATTTACTCAGAAGAAGAAAGGAAATATAACAAAGAAACTACTATTGGCCTCATCCGCAGTGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCAAAACTTATTGATGGAGGAAGGAACAAGGCTGCAACGGAATTTTCCATTTCCCTTCTTCAAACCCTGGTTATCGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCTAAGCTTGCTACAAAGCCTGGATGCCCTGAGCCATTACCACAGCTTCTTGAAATGATCAAGAATCCTGGTGCTCTATCCTCTGGCACTGCTGGAAAAGAGGATAAGGCAAGACAATCAAGAGACATTAAGGTTCCTGGTCTGCTACCTGCAAACAGGGAAGAGTTCAACGGCGTGGATTCTATTGAACCAGATCCGGCTGGGTTCCGGGAACAGGTTTCCATTTTGTTTTCAGAATGGTATAGGATATGTGAACTTCCTGGTGCCAATGATACAGTCTCTGCCCACTTCATCTTGCAATTGCATCAGAATGGACTGCTGAAGGGGGATGATCTTACAGATCGCTTCTTCCGCCTATTACTGGAGCTTGCTGTTGCACATTGCTTATCCACTGAAATGATTAATTCAGGATCACTACAATCCCAACAGCTGCAGACAATGTCATTTCTTGCAGTTGATATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAACCCTTTCTTCTTTCCAAGATTCTGGCAGTTGCTGTCAGATTCATTATAAAAGATGCAGAGGAGAAGAAAGCATCTTTTAATCCAAGACCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGACGGTGCAAATCTCCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCATTGCAGCCGCTTAAAGTTCCTGTGTTCAGTTTTGCATGGCTTGAGCTGATAAGTCACAGGAGCTTCATGCCTAAAATGTTGACTGGTAATGGTCAAAAGGGTTGGCCATATATCCAACGGTTACTTGTAGACCTGTTCCAATTTATGGAGCCCTTTCTGAGGCATGCTGAATTGGGAGACCCGGTCCGTGTACTCTACAAAGGGACACTTAGGGTGCTCTTAGTGCTACTTCATGACTTCCCCGAGTTTCTATGTGACTATCACTTTACCTTTTGTGATGTCATACCTCCAAGTTGCATACAGATGAGGAATATCATTCTAAGTGCATTTCCACGTAGTATGAGGCTGCCCGATCCATCTACTCCAAATTTGAAGATTGATTTACTTCAAGAAATTACTCAATCACCCCGCATTCTTTCTGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGACTACCTCAAGACAAGGCAACAAAATTCTCCATTTTTGTCTGAACTGAAGGATAAGATGCTTCTCGCACCCAATGAAGCTGCCTCTGCTGGGACTCGATACAATGTGCCGTTAATCAACTCACTTGTGCTATATGTTGGAATGCAGGCAATCCATCAGCTTCAGGGAAGAACTCCCCATGCACAATCTTCAGCAAATGCTTTCCCCTTGGCCGTATTTTCTGTTGGTGCTGCTTTGGATATTTTCCAGACACTGATTGTGGACTTGGACACCGAAGGCCGCTACCTTTTTCTAAATGCCATTGCCAACCAACTGCGTTATCCTAATACCAACACACACTACTTTTCTTTCATCCTTCTTTACTTGTTTGCTGAATCAAACCAGGAAGTTATCCAAGAACAAATTACTAGAGTCTTGTTGGAACGCCTAATTGTTAACCGTCCTCATCCCTGGGGCCTCCTCATTACCTTTATTGAACTTATCAAGAATCCTAGGTATAACTTCTGGAACCGGAGTTTCATCAGATGTGCCCCAGAGATCGAAAAGCTTTTTGAATCTGTGTCAAGATCTTGTGGAGGTCCAAAACCAGTGGATGACAACATGGTGTCTGGTTGGGTCTGA 7218 0.4192 MKTLLHSLPSMSNFSSNQIRFLLTTLNEVNFDSVFHQLSQFAEFGTTGCILLLQTCLDHYGYARRDTKDMQHEPILGAVIKYLLDKPNFSTVFSESMKNMEINESFLENFCNGLQLSLLEKMVISLALSDSENPDVRLCGKNFCMSQIEELCANPGSMSFHEQIHSIIMFLKQSEGLSKHVDSFMQILSLVEFKDAPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDTILADIQKEMNMGDIVKELGYGCTVDVSQCKDIFSLFLPLTEHTLSKLLGAIACTHTGLEDNQNTYLNFRAAHGYNVSELPPLNSWNIDVLIDTVKHLAPHTNWVRVIENLDHEGFFLPSEDAFSFLMSVYKQACKEPFPLHAICGSVWKNTEGQLSFLKYAVSAAPEMFTFAHSGRQLVYADAINGHKLQNGHPNHSWLCLDLVDVLCQLAEKGHASVVRSILDYPLKHCPEVLLLGMAHINTAYNLLQQEVSLIVFPMIIKSAVGSGMILHLWHVNPNLVFRGIIDSQNHDTDSIIRIVDICQELKILSTVVEIIPSHYSIRLAAVASRKELLDFEKWLSSNLITYKETFFEECLKFLKDAHFGGSQNLSGQSFHPSSAVLSLYAETAATVLKVLKSHNDLVAPRHLSEELERLHISIIDSNPRIQNGGAADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFDCMTANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDSDGASHASVISNHHSAQATLGHVEQLSGSTVIQPGQQHLSLQLQQRRENLLDDRHKASLGSSTDVKPQLSSLGQSSVLTPTDASNTNKLHSSVSTSSMLSSSPGFVRPSRVPTSTRFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLVEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREFEGNPDFSNKDVGASQSQMITDIKSGLVPPVNQVELPLEVTNQSNTGAHPHMLSQYAGPLHMSSGALMEDEKVTPLGLSDQLPSAQGLLQATPAPAPFSISQLPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAVQSGNTGLPSTNGSVSGQVNPGYPVSTGYEGVSRPLEDMAESNLAPHFSASSIHIRASDSASQLSLEKESVASFPSAASTPELHAVDSSDVKESGTSSQTLVTSGAMERLGSSFLEPSLTTRDALDKFQIVAHKLEAMVSNDSRDAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNNIHVSAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKETTIGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKLATKPGCPEPLPQLLEMIKNPGALSSGTAGKEDKARQSRDIKVPGLLPANREEFNGVDSIEPDPAGFREQVSILFSEWYRICELPGANDTVSAHFILQLHQNGLLKGDDLTDRFFRLLLELAVAHCLSTEMINSGSLQSQQLQTMSFLAVDIYAKLVFSILKGSNKPFLLSKILAVAVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPVFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDDYLKTRQQNSPFLSELKDKMLLAPNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHAQSSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDNMVSGWV 2405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g02017 2405 Gene3D - 942 1190 - -
Phco1g02017 2405 Gene3D - 2156 2385 - -
Phco1g02017 2405 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 969 1188 IPR032191 -
Phco1g02017 2405 Coils Coil 1401 1421 - -
Phco1g02017 2405 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 655 825 IPR032193 -
Phco1g02017 2405 Gene3D - 1868 2155 - -
Phco1g02017 2405 Pfam CCR4-Not complex component, Not1 2017 2386 IPR007196 -
Phco1g02017 2405 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 35 2394 IPR040398 GO:0017148|GO:0030015
Phco1g02017 2405 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 483 628 IPR032194 -
Phco1g02017 2405 FunFam CCR4-NOT transcription complex subunit 1 2156 2385 - -
Phco1g02017 2405 MobiDBLite consensus disorder prediction 1508 1542 - -
Phco1g02017 2405 FunFam Transcription regulator 1867 2159 - -
Phco1g02017 2405 MobiDBLite consensus disorder prediction 890 928 - -
Phco1g02017 2405 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1315 1457 IPR024557 -
Phco1g02017 2405 MobiDBLite consensus disorder prediction 893 928 - -
Phco1g02017 2405 Gene3D - 661 828 IPR038535 -
Phco1g02017 2405 FunFam Ccr4-Not transcription complex subunit 942 1190 - -
Phco1g02017 2405 CDD NOT1_connector 1639 1830 - -
Phco1g02017 2405 MobiDBLite consensus disorder prediction 1594 1617 - -
Phco1g02017 2405 FunFam Transcription regulator 661 829 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g02017 1 59976311 59997927 Phco1g02017 1 59976311 59997927 ECH