Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01959 ATGAAGCTTGGTGTGAGAGTAGGTTCAATCCAACCACATGCATCACCCTCTATTTCCCAATCCAACCCTACTTCTCCATCTTTCAAATCCAACATAAGCTCACAATTCAACTTGCGATCACGGAACCAACTCAAGCTTCACTCAACCAAATGCAACTTCCCCAACCTCCGAAACAAATGGAAGCAATACCAAGGAATCAACCATTGGGAAGGCTTGTTGGATCCTCTTGATGACAACCTACGATGGGAAATCCTAAGATATGGTCACTTTGTAGATGCTACCTATAGCTCTTTTGACTTCGACCCTTCTTCTCTAACCTATGCCAAATCTCTTTACTCCAAAAAATCACTTCTGAAAAAATGTGGTTTGGGAAAGTATGGTTATCGAATAAGCAAATATCTATATGTGACGTGTGGAATTCACATGCCAACATGCATAAACAAAATTTTCAAGAAGCTGTTTACTCGATCAAGTTTGATTGGATACGTGGCAATATGTGTAAATGAGAAAGAAATTACACGACTTGGTCGAAGAGACATTGTGGTTGCTTTCAGAGGAACAGTTACATGTTTGGAGTGGTTGGAAAATTTACGTGTGTTCTTAACACAGTTGCCGGGTCTTGTGAAGGGAGAAGATGATGTTGGTCCAATGGTGCAGAAGGGTTTTTTGAGCCTTTACACGTCCAAAACCACCCCACATGGAAGTTTGCAAGAGATGATAAGAAAAGAGATTGGAAGAGTGATTCAAAGGTACACCAATGAGCCTCTTAGTTTAACCCTAACGGGTCATAGTCTTGGAGCAGCACTAGCCATTTTGAGTGCTTATGATATAACTGCAACTTTCAACAATGCACCAATGGTTACTGTTATATCATTTGGTGGACCCCGTGTGGGAAATGAGAGTTTTAGGAACCAGTTGGAACAAAAAGGGATTAAGATACTAAGAATAGTGAACTCTGATGATGTTGTTACAAAAGTTCCGGGGCTTTTTGTGAATTTTGATGAAGTGGTAAGTGATGAAGATGTTGGTGTCGGAATTTGGTCAAAATGGTTTTACAAGTACATACAAAATATGCAATTGGTGTATGTTGACATTGGACAAGAGTTGAGGTTAAGTAGCAGAGAGTTTCCATGTCTCAATAAGACAGATGTTGCTATGTGTCATGACCTCAAAACATATCTTCATTTGGTCAAAAATTTTGTAAGCTCCTCTTGTGCTTGCAAACACACAAAAATTCACTCCATTCAGTCATAA 1254 0.3955 MKLGVRVGSIQPHASPSISQSNPTSPSFKSNISSQFNLRSRNQLKLHSTKCNFPNLRNKWKQYQGINHWEGLLDPLDDNLRWEILRYGHFVDATYSSFDFDPSSLTYAKSLYSKKSLLKKCGLGKYGYRISKYLYVTCGIHMPTCINKIFKKLFTRSSLIGYVAICVNEKEITRLGRRDIVVAFRGTVTCLEWLENLRVFLTQLPGLVKGEDDVGPMVQKGFLSLYTSKTTPHGSLQEMIRKEIGRVIQRYTNEPLSLTLTGHSLGAALAILSAYDITATFNNAPMVTVISFGGPRVGNESFRNQLEQKGIKILRIVNSDDVVTKVPGLFVNFDEVVSDEDVGVGIWSKWFYKYIQNMQLVYVDIGQELRLSSREFPCLNKTDVAMCHDLKTYLHLVKNFVSSSCACKHTKIHSIQS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01959 417 Gene3D alpha/beta hydrolase 59 414 IPR029058 -
Phco1g01959 417 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 44 410 - -
Phco1g01959 417 MobiDBLite consensus disorder prediction 12 30 - -
Phco1g01959 417 Pfam Lipase (class 3) 181 329 IPR002921 GO:0006629
Phco1g01959 417 CDD Lipase_3 128 335 - -
Phco1g01959 417 SUPERFAMILY alpha/beta-Hydrolases 127 373 IPR029058 -
Phco1g01959 417 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01959 Phco-Chr1 59270100 59271353 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01959 1 59270100 59271353 Phco1g01959 1 59270100 59271353 ECH
Phco1g01959 1 59270100 59271353 Phco3g02760 3 53993768 53995081 PCT