Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01956 ATGGCCACTGCCAATCCCTTTGATTTGTTGGGCGACGATGCCGAGGACCCGTCGCAGTTGATCGTGACCGAGCAGTTGAAGGCCGCGGCGGCGGCGAAGAAGGAGCAGGGTAAGCCTGGACCCCGCGGGGGTGCGGCGGTGGCCCAGCAGAGCAAGCCGGCTCAGATGCCTTCCAAGCCAATCCCTCCCACTCAGGCTGCGAGGGAGGCAAAAAATGAAACTTCTTATGGTGGCCGTGGAGGTGGCCGAGGAGGTGGACGAGGGTATGGACGTGGACGTGGTGGTGGCAGTGGCTTTGGTCGTGATTTTTCCAATGATGAGAACTCAACTGCCCCTGCTAACCAAGGATCTTTTGAAGGAGAGGCTGGAAATCCCTCAGAAAGAAGTGGTTATGGTGCACCACGCGGGCCCTATCGTGGTGGTGGTCGTGGCCGTCGTGGAGGTTTTAGCAATGGTGAAGTTGGTGAAGACGGACGCCCAAGAAGAGCCTTTGAACGTCACAGTGGGACTGGACGAGGAAGTGAATTCAAACGGGATGGTGCTGGACGAGGAAACTGGGGTACCCAGTCTGATGATATTGCTCAGGTGACGGAGGAAGTGGGGGATGAAACTGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGCGAGGAAGCTGCAGCAGATGGAAACAAGGACAGTCCTGCTAATGAAAATGAAGAGAAGGAGCCTGAGGAGAAGGAGATGACCCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCTCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAGCCACTCTCAAACAAGAAAGACAATGATGAGATATTTATTAAACTGGGATCTGACAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACGAGTGGCCGTGGGAGGGGACGTGGTCGTGGTGGTGGCCGAGGAGGAGGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTGACAGCTCCATCAATTGAGGATCCTGGGCAATTCCCAACCTTGGGTGGTGGCAAGTGA 1125 0.5369 MATANPFDLLGDDAEDPSQLIVTEQLKAAAAAKKEQGKPGPRGGAAVAQQSKPAQMPSKPIPPTQAAREAKNETSYGGRGGGRGGGRGYGRGRGGGSGFGRDFSNDENSTAPANQGSFEGEAGNPSERSGYGAPRGPYRGGGRGRRGGFSNGEVGEDGRPRRAFERHSGTGRGSEFKRDGAGRGNWGTQSDDIAQVTEEVGDETEKNFGDEKPVGEEAAADGNKDSPANENEEKEPEEKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSDKDKRKDALEKEERSKKSVNITEFLKPAEGERYYNTSGRGRGRGRGGGRGGGGGYSGNAGSNVTAPSIEDPGQFPTLGGGK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01956 374 Coils Coil 243 266 - -
Phco1g01956 374 MobiDBLite consensus disorder prediction 199 219 - -
Phco1g01956 374 MobiDBLite consensus disorder prediction 29 244 - -
Phco1g01956 374 Pfam Stm1 1 81 IPR019084 -
Phco1g01956 374 Gene3D - 158 271 - -
Phco1g01956 374 MobiDBLite consensus disorder prediction 283 313 - -
Phco1g01956 374 SMART HABP4_PAI_RBP1_2 160 268 IPR006861 -
Phco1g01956 374 MobiDBLite consensus disorder prediction 150 179 - -
Phco1g01956 374 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Phco1g01956 374 Pfam Hyaluronan / mRNA binding family 160 267 IPR006861 -
Phco1g01956 374 MobiDBLite consensus disorder prediction 226 244 - -
Phco1g01956 374 MobiDBLite consensus disorder prediction 102 122 - -
Phco1g01956 374 MobiDBLite consensus disorder prediction 259 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01956 Phco-Chr1 59222671 59225805 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01956 1 59222671 59225805 Phco1g01956 1 59222671 59225805 ECH
Phco1g01956 1 59222671 59225805 Phco3g02757 3 53942959 53947337 PCT