Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01893 ATGGCATCAACGTTTCTCACCCTACCAACTCCCTTCCTAAACAAAAGCAATGCCATTTCTTTCTCTAACAAGAGACCCTCATTTTCGCAGAGGAGCTCTCTGAAGATCAATGCAATTGCAAAAACATGGGAACCTACTAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAAGAGCTATCGGATAAAACAGCTGGGGGAGTTTTGCTGCCCAGGTCAGCTGTGAAATTTGAGAGATATCTCGTGGGAGAAATTCTAAATGTTGGTGCTGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAGCGCATATGAGGTTGATTTGGGGACTGATGCGAAGCACTGCTTCTGTAAAGCAAGTGACTTGTTGGCTGTGGTTGAGTAG 405 0.4494 MASTFLTLPTPFLNKSNAISFSNKRPSFSQRSSLKINAIAKTWEPTKVVPQADRVLIRLEELSDKTAGGVLLPRSAVKFERYLVGEILNVGAEAGELKAGTKVLFTDMSAYEVDLGTDAKHCFCKASDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01893 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Phco1g01893 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Phco1g01893 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
Phco1g01893 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Phco1g01893 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Phco1g01893 134 FunFam 10 kDa chaperonin 43 134 - -
Phco1g01893 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01893 Phco-Chr1 58618522 58621594 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01893 1 58618522 58621594 Phco1g01893 1 58618522 58621594 ECH