Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01881 ATGGCTTCAAGACCTGGAATTCTCACAGATTGGCCATGGAAACCTCTCGGAAGCTTTAAGTATGTGGTGCTAGCTCCATGGGTGGTTCACAACACCTATTCAATGTTGGTGAAGGATAAGAAGGAAAGGGATATGAGCAGTTTTCTGATATTACCACTTTTGCTTTGGCGTATGGTTCATAATCAGATATGGATCACTCTCTCTCGTTATAGAACAGCCAAAGGAAATGGTAGAATTGTTGATAAAGGACTTGAATTTGATCAAGTTGATAGAGAAAGAGAATGGGATGATCAAATACTGTTCAATGGGTTACTATACTACTTGGCCTGCTACACATTACCTGGTGCATCTCATCTTCCATTGTGGAGAACTGAAGGAGTGGTTATGGCAATGCTGCTTCATGCAGGACCTGTGGAGTTTCTGTATTATTGGTTACACAGAGCACTTCACCATCATTTTCTCTACTCCAGATACCATTCTCACCACCATTCTTCCATTGTCACAGAACCTATAACTTCTGTGATTCATCCATTTGCTGAACACATATCATATTTTCTTCTGTTTTCAATACCCATGTTAACCCTAGTATTCACAAACACAGCTTCTGTGGGGGCCATGGTAGTGTATGTCACTTACATTGATTTCATGAATAATATGGGTCACTCCAACTTTGAGGTCGTTCCAAAGTGCCTCTTTGCCATCTTTCCTCCTCTCAAATATCTCATCTACACCTCATCGTTTCATTCATTGCACCATACCCAGTTCAGAACAAACTACTCCTTGTTTATGCCATTTTATGACTACATCTATGGCACCACAGATAAGGCTTCTGATACATTGCAGGAATCAGCATTAAAACGAGAAGAAGAAACCCCAGATGTTGTGCACCTTACACATCTCACAACCCCTCAATCGATCTATCATCTCAGGCTTGGATTTGCTTACTTGGCTTCTAAGCCTTACACATCAAAATGGTACCTGAGTTTGATGTGGCCTTTCACAGCTTGGTCCATGATCCTCACATGGATCTATGGTACAACATTCATTGTGGAGGCAAATCGTTTTGACAAACTCAAGCTGCAAACTTGGGCAATTCCCAAGTACAGTCTCCAATACTTCTTGCAATCACAAAAAGTGGCCATTAACACAATGATAGAAAAAGCAATACTGGATGCAGACAGAAAAGGAATAAAAGTGTTGAGCTTAGGGCTAAGAAATCAAGGAGAGGAGCTTAACATCTATGGAGGATTATATGTTAGTAGACATCCAAAGTTGAAAGTTAAGATTGTAGATGGAAGCAGTCTTGTAATTGCTGTTGTTCTTAACACCATTCCCAAAGGAACAACTCAAGTGTTGCTTAGGGGAAAACTCACTAAGGTTGCTTATGGCCTTGCCTTCTCATTGTGTCAACAAAATGTTCAGGTTGGTACATTGCATGAGGAAGATTATGTGAGGCTCAAAAAGTCATTCAAGAGCTCTGAAACTAATTTGACCTTTTCCAAAAGTAGCACACAGACGGTTTGGTTAGTAGGAGATGAACTGAGTGAAGAAGAACAACTAAAGGCACCCAAAGGAACATTATTTATTCCATACACACAATTTCCACCAAAGAAATATCGCAAGGATTGCTTCTACCATTCCACACCAGCAATGTTAGCTCCTCCTTCTGTTGAAAATATCCATTCTTGTGAGGATTGGTTGCCAAGAAGGGTAATGAGTGCATGGCGCATAGCTGGGATAGTACACTCTCTTGAAGGATGGAATGAACATGAGTGTGGCCACACAATGAATAACATTGACAAAGTTTGGGATTCAACTCTTCAACATGGATTCAAACCTCTTCCTATACAAGTCAAAGAGTTAGCTTAA 1869 0.4045 MASRPGILTDWPWKPLGSFKYVVLAPWVVHNTYSMLVKDKKERDMSSFLILPLLLWRMVHNQIWITLSRYRTAKGNGRIVDKGLEFDQVDREREWDDQILFNGLLYYLACYTLPGASHLPLWRTEGVVMAMLLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFSIPMLTLVFTNTASVGAMVVYVTYIDFMNNMGHSNFEVVPKCLFAIFPPLKYLIYTSSFHSLHHTQFRTNYSLFMPFYDYIYGTTDKASDTLQESALKREEETPDVVHLTHLTTPQSIYHLRLGFAYLASKPYTSKWYLSLMWPFTAWSMILTWIYGTTFIVEANRFDKLKLQTWAIPKYSLQYFLQSQKVAINTMIEKAILDADRKGIKVLSLGLRNQGEELNIYGGLYVSRHPKLKVKIVDGSSLVIAVVLNTIPKGTTQVLLRGKLTKVAYGLAFSLCQQNVQVGTLHEEDYVRLKKSFKSSETNLTFSKSSTQTVWLVGDELSEEEQLKAPKGTLFIPYTQFPPKKYRKDCFYHSTPAMLAPPSVENIHSCEDWLPRRVMSAWRIAGIVHSLEGWNEHECGHTMNNIDKVWDSTLQHGFKPLPIQVKELA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01881 622 PANTHER STEROL DESATURASE 13 613 - -
Phco1g01881 622 Pfam Fatty acid hydroxylase 136 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Phco1g01881 622 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01881 Phco-Chr1 58383062 58395342 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01881 1 58383062 58395342 Phco1g01881 1 58383062 58395342 ECH