Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01874 ATGGCTTATTCTTCTTGTTCTTGTTCTCGTTTGTTGTTGCAATTACAGAGTTCTTCGCGAGTAATGTTACGTCTCTCACCCTTTCTCGCTACTCCTCCTTCTTCTTCTCTCTCTTTCTCCTCCAACTGCCACGTGTCCTCTTCAGCTCAATCCACACTCCAAAAGGCACATCAACGAAGCTCAGAAATGGTGGCATTGGAATATGCTGACCTCAATCTCTCTTACAACTTGGATCTGGGTCACCTCAGGATCAGACAACATGTTAATCCTCTAAGCTCTTCTATCTCTGTTCCTGCAGAAGTACCAGACTGGAACCAGGTCTTTGCAGACCCAATGTTGCCACTCATGGTGGACATTGGATGTGGCAGTGGCAGGTTTCTAATGTGGTTGGCTAAAAGAACTCCTAAAGAGAGAAATTTTTTGGGACTGGAAATCCGAGAAAGGATTGTCAAGCGTGCTGAGACATGGGCAAAGGATCTGGCTCTCAATAACATACATTTCTTGTTTGCAAACGCCACAATTTCTTTCAAGCAGTTGGTAGAATCATATCCTGGGCCCTTAGTCTTAGTTTCAATTCTGTGTCCAGACCCACATTTCAAGAAAAGACATCATAAAAGAAGAGTTCTCCAGAAGCCTTTGGTTGGTGCTATAGTGGACAATTTAATGCCAGGGGGACAGGTATTTGTACAGTCTGATGTGCTTCAAGTGGCACTTGACATGAGAAATCAGTTTGATGAAGTTGAAGCACTGAAACACATAGATGTTTCCAACCCAGCTTCTATGTTGTGTGACAGTGAAGGGTGGTTGTTAAGCAACCCCATGGGAATAAGGACTGAGAGAGAGATTCATGCAGAACTTGAAGGTGCAAAAATCTTTAGAAGATTGTACCAGAAACAGATATGA 903 0.433 MAYSSCSCSRLLLQLQSSSRVMLRLSPFLATPPSSSLSFSSNCHVSSSAQSTLQKAHQRSSEMVALEYADLNLSYNLDLGHLRIRQHVNPLSSSISVPAEVPDWNQVFADPMLPLMVDIGCGSGRFLMWLAKRTPKERNFLGLEIRERIVKRAETWAKDLALNNIHFLFANATISFKQLVESYPGPLVLVSILCPDPHFKKRHHKRRVLQKPLVGAIVDNLMPGGQVFVQSDVLQVALDMRNQFDEVEALKHIDVSNPASMLCDSEGWLLSNPMGIRTEREIHAELEGAKIFRRLYQKQI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01874 300 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 57 298 IPR003358 GO:0006400|GO:0008176
Phco1g01874 300 Pfam Putative methyltransferase 114 292 IPR003358 GO:0006400|GO:0008176
Phco1g01874 300 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 73 298 IPR003358 GO:0006400|GO:0008176
Phco1g01874 300 Gene3D Vaccinia Virus protein VP39 84 299 IPR029063 -
Phco1g01874 300 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 100 296 IPR003358 GO:0006400|GO:0008176
Phco1g01874 300 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 253 IPR029063 -
Phco1g01874 300 FunFam tRNA (Guanine-N(7)-)-methyltransferase 83 300 - -
Phco1g01874 300 CDD AdoMet_MTases 117 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01874 Phco-Chr1 58319092 58322696 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01874 1 58319092 58322696 Phco1g01874 1 58319092 58322696 ECH