Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01816 ATGGCTTCCCTCTCCCAAGGCGATCACCAACAGATTCTGGAGGAGCGTAAATTAAATGCGAGAGTTTTGACCCTAAACAGGCCTAAGCAGTTGAATGCCCTCTCTTTTTATATGGTTTCACGGCTGCTTGAAGTTTTTTCTGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGTCTTTTTGTGCTGGTGGTGATGTGGCGGCTGTTGCTCGTGAAGGAAGTAAAGGTGACTGGAAGAGTGGTGCAACATTTTTTCGTACAGAATATAGATTGAATTACTTGATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTTATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATGCGGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTGCCGCATATTTCCTGTCTAGAGTGCCTGGCTTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGAATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTTCCTTCATCGAAATTGTCTTTATTGGAAGAAGCATTATGCAAGGTGGAAACTAGTGATCCAAATGCAGTGTCTGTAATTATCGATAAGTACTCAGAGCAACCTTTCCTAAAAGACGACAGTGTTTATCACAGGATGGATGTGATCAACAAGTGCTTCTCAATAAAATCAATCGAGGGAATAATATCTTCTCTTGAGATAGAAGCTATGGGTAAGGCTCATCATTGGATTTCTGAAACTGTTCAAACCTTAAAGAAAGCATCTCCAACAAGCCTGAAAATCTTTCTTAGATTGATTAGAGAAGTCAGGCTCCTAGGTATTGGTCCATGCCTTGTTCTTGAATATAGAATTGTTTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTTTTAGATAAGGACAGGAACCCAAAGTGGGAACCTTCCAAATTGGAGCTTCTTAGTGATAGAGATATCGACCGTTACTTCACTAAGCTTGAGGATGAAGAATGGGAAGATTTGGAACTTCCTAAAAGGTTTAACAATCTTCCTACATATGCTATTTCAAAGCTGTAA 1149 0.4038 MASLSQGDHQQILEERKLNARVLTLNRPKQLNALSFYMVSRLLEVFSEDEENSDIKLVVVKGNGRSFCAGGDVAAVAREGSKGDWKSGATFFRTEYRLNYLMATYSKPQVSILNGIVMGGGAGASVHGRFRVVTENAVFAMPETALGLFPDVGAAYFLSRVPGFFGEYVGLTGARLNGAEMLACGLATHFVPSSKLSLLEEALCKVETSDPNAVSVIIDKYSEQPFLKDDSVYHRMDVINKCFSIKSIEGIISSLEIEAMGKAHHWISETVQTLKKASPTSLKIFLRLIREVRLLGIGPCLVLEYRIVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLELLSDRDIDRYFTKLEDEEWEDLELPKRFNNLPTYAISKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01816 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 379 IPR032259 GO:0003860
Phco1g01816 382 SUPERFAMILY ClpP/crotonase 15 340 IPR029045 -
Phco1g01816 382 Gene3D - 7 369 - -
Phco1g01816 382 CDD crotonase-like 12 203 - -
Phco1g01816 382 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 6 371 - -
Phco1g01816 382 Pfam Enoyl-CoA hydratase/isomerase 21 354 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01816 Phco-Chr1 57747813 57767927 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01816 1 57747813 57767927 Phco1g01816 1 57747813 57767927 ECH