Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01668 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGATCCGTGAAGGAACGCCTAAATGGGAATGGTATCAGTGGCCCTACTCGGCAGCAGCAGCAGCGTCAAATCACCGGCAAGAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGATGATGATGAACCACGGATCGCTAATCGCAAGGTTAGTGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAAGATGCAGGATCTCCGTGAAAGGCTATCGGGGACAATGACAGTAAAACCTACAAATAGTGATCTGCCAAAATCAAAAGCTGTTAAACCAAGCAGTAAAAATGTTGTTGTCGAGGCCCCTGCAGTGCAGATCAAAAGGCCAGCTGAACCAGCTCCTAAAAGGTCACGGAAGGGTGATTCTTCAATTGATGAATTTTTGCGGTCCTTGGGTCTTGAAAAGTACCTCATTACTTTTCAGGCTGAAGAAGTTGACATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGCATGCCAATGGGACCAAGAAAGAAGATACTTTTAGCATTGGAGTCGAAAGTCTAA 621 0.4622 MYADRVENGGRRSVKERLNGNGISGPTRQQQQRQITGKRSRQDDKWEHDLFDDDEPRIANRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMQDLRERLSGTMTVKPTNSDLPKSKAVKPSSKNVVVEAPAVQIKRPAEPAPKRSRKGDSSIDEFLRSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGMPMGPRKKILLALESKV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01668 206 MobiDBLite consensus disorder prediction 1 59 - -
Phco1g01668 206 FunFam Sterile alpha motif domain-containing protein 148 206 - -
Phco1g01668 206 MobiDBLite consensus disorder prediction 102 123 - -
Phco1g01668 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Phco1g01668 206 MobiDBLite consensus disorder prediction 102 116 - -
Phco1g01668 206 CDD SAM_superfamily 153 203 - -
Phco1g01668 206 Gene3D - 148 206 IPR013761 -
Phco1g01668 206 Pfam SAM domain (Sterile alpha motif) 147 203 IPR001660 GO:0005515
Phco1g01668 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Phco1g01668 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Phco1g01668 206 MobiDBLite consensus disorder prediction 20 36 - -
Phco1g01668 206 MobiDBLite consensus disorder prediction 37 59 - -
Phco1g01668 206 PANTHER SCP160 29 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01668 Phco-Chr1 54610719 54619120 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01899 3 43366857 43370561 Phco1g01668 1 54610719 54619120 PCT