Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01604 ATGGAGTTCGAAGACCGCTTCAGACACCAGGCTCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTCAAATCTGGTCTTGCAGAAGCATGTCTCAAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATACACCCTAGCAAAATTGATGACTTGTCCAACCTCCTTTACAAGAATTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGACGAATATCATAGTTTTGTTCATGGGAGATTACCTTATGAGAACCTAAAACCAGACCCAGTTCTGAGGAACCTGTTGCTGAGCCTGCCCTACAGGAAACTTATCTTCACAAATGCAGACAAAGTCCACGCGGCTAAGGCACTTAACAGGCTTGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAGTTTGTGGGTTCAAGGACAACCACTACTAGTAATGGTCCAGCCACTTCTCAAATCTTTGACATCATAGAACATTTTGCTAAGCCCAATCCCAGTTCAGTCTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAATTGGCCCTCAAGATAGCCGACCTTAAACCTCAAAGAACATTGTTCTTTGAGGACAGTACCCGTAACATACAAGCTGGAAAACGTGTGGGGCTTCACACTGTGCTGATTGGTACATCACAAAGATGTAAGGGTGCAGATTATGCCTTGGAAAGCATTCACAACCTTAAGGAAGCTGTGCCACAACTATGGGAAGCTGATATAAAATCAGAAGTTGCATACCCTGCAAAGATAGCTGTGGAGACATCAGTCACAGCTTGA 903 0.4219 MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGLAEACLKNIKDYMVEKLGIHPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGSRTTTTSNGPATSQIFDIIEHFAKPNPSSVLPKTPIICKPSENAIELALKIADLKPQRTLFFEDSTRNIQAGKRVGLHTVLIGTSQRCKGADYALESIHNLKEAVPQLWEADIKSEVAYPAKIAVETSVTA 300
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01604 300 NCBIfam pyrimidine 5'-nucleotidase 17 250 IPR010237 -
Phco1g01604 300 Pfam Haloacid dehalogenase-like hydrolase 208 250 IPR041492 -
Phco1g01604 300 SFLD Haloacid Dehalogenase 10 279 - -
Phco1g01604 300 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 6 299 - -
Phco1g01604 300 SUPERFAMILY HAD-like 15 278 IPR036412 -
Phco1g01604 300 NCBIfam HAD-IA family hydrolase 206 251 IPR006439 -
Phco1g01604 300 Gene3D - 82 278 IPR023214 -
Phco1g01604 300 SFLD C1.5.3: 5'-Nucleotidase Like 10 279 IPR010237 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco1g01604 Phco-Chr1 53719713 53721531 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02038 3 45921276 45923214 Phco1g01604 1 53719713 53721531 PCT