Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01287 ATGACCCAACCATTTAAGGCCAAGAGCGCATCACCGGCAAAAGGGACGACCCAACCGGTGCACACCACAAGCGAACCAATCGACCCAACCCAAGGACCAGTGAGGCCTCAATTTGTGTTGTTTGGTTCATCCATAGTTGAGCTCAGTTATAGTTGTGAAGGTTGGGGAGCTACTCTTGCCAACTTGTATGCTCGCAAGGCAGATGTAATTTTGAGAGGATATTGTGGTTGGAACTCGAGGCGTGCTCTGCAGGCTCTGGATAAAATATTTCCCAAGGATGCCACTGATCAACCATCATTGGTAATTGTGTACTTTGGTGGTAATGATTCTATGCATCCACACCCAACTGCCCATAGTCCTCATGTACCCCTCCAAGAATACATTGAAAATATGAGGAAGATTGCAATCCATCTAAAGGGCCTTTCAAAGAAGACTCGCTTAATATTTCTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAATGCTCAGTGATCTGCTGGGTCCATTAAAAAGGACAAATGAATCTTGTCGAATATACTCAGAAGCATGTTTGGAGCTGTGCCGTGAGATGAATGTGAAAGCCATTGATCTCTGGTCTGCAGTCCAGCAAAGGCACGACTGGTCAGATGTTTGCTTCACGGATGGAATTCATTTGTCACATGAGGGAAACAAAATAGTGGCAAAAGAGATACTGAAGGTCCTCAGAGAAGCAGACTGGGAACCTAGTCTGCACTGGAACTCAATGCCAACGGAGTTTGCAGAAGATTCACTTTATGATCCAAATGGTGCGGATGAGGAGAGTATTATAAATGTCTCTAACGGGAATTTCCAGGGAAACTCTCAATCAAAGTAG 858 0.451 MTQPFKAKSASPAKGTTQPVHTTSEPIDPTQGPVRPQFVLFGSSIVELSYSCEGWGATLANLYARKADVILRGYCGWNSRRALQALDKIFPKDATDQPSLVIVYFGGNDSMHPHPTAHSPHVPLQEYIENMRKIAIHLKGLSKKTRLIFLSSPPINEVQMHEMLSDLLGPLKRTNESCRIYSEACLELCREMNVKAIDLWSAVQQRHDWSDVCFTDGIHLSHEGNKIVAKEILKVLREADWEPSLHWNSMPTEFAEDSLYDPNGADEESIINVSNGNFQGNSQSK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01287 285 SUPERFAMILY SGNH hydrolase 23 236 - -
Phco1g01287 285 Pfam GDSL-like Lipase/Acylhydrolase family 40 227 IPR013830 -
Phco1g01287 285 Gene3D SGNH hydrolase 35 265 IPR036514 -
Phco1g01287 285 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 29 275 IPR045136 -
Phco1g01287 285 MobiDBLite consensus disorder prediction 1 33 - -
Phco1g01287 285 CDD Isoamyl_acetate_hydrolase_like 37 236 - -
Phco1g01287 285 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 35 267 - -
Phco1g01287 285 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01287 Phco-Chr1 23148919 23154125 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02214 3 48471771 48474234 Phco1g01287 1 23148919 23154125 PCT