Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01116 ATGGAAGTTTCCGACACGGCGGCGAACAGGCCCGGATCGGGTTTCAGGGCGGAGATCGATACATCGGCGCCGTTCGAGTCGGTTAGGGAAGCCGTCTCGCGATTTGGCGGCGTTGGGTATTGGAAACCCATTATTAACGGTCTTAGCAATAAGCACTTTGCGCCTGAGCTGCATCACACAGAAGAGCTTGACCCTGGAAAACTGGAGGAGCAAGCTGCTGTTTTGGAAAAAGAGCTGATCCTGAAAGAAAGGGAAACTCTCGAGGTCTTGAAAGAGTTGGAAAGTACCAAAAGGCTTGTGGAGAATATGAAATCGAAGTTGCAGAAAGAAGAAGAAGCGAAATTGAATTTTCAAATGAGTGTATGCAATGATATGTCTTTAGTTAATGACGATGAGAAAGAAGATAAGGAAAACCAAGTGATTGTTCAGGATTTGAAGGAAGGTTGTATCCCCTGTCCTTCATCAGCCCCGGGTTTAATACTAATGGAATTGAAGCAAGCAAAATTGAATCTGAACAGAACCACAAGTGATATTGCTGATGTTCGTGCATCTGTTGAATCACTCAATAAGAAGTTAGGGAAGGAAAGACTATCCCTTGGGAAGACACGGGAGAGGTTAACTCAAAATTCTTCAAAGATATGCTGCCTTGAGGAAGAGCTAAACCAGACAAAACTAAAACTGCTTGTGGCAAAAGATGCTTGTTTGGATAACCCTTCAGATATTACAAAAGAGCTCCAGCGACTGAGTTCTGAGGCAGAGCATTTCAAGAAAATGGGAGAAGCTGCTAAATCAGAAGTCTCCGAAGCAATGTCTAAGATTGAACAGACGAAAGCTATGATAAAAACTGCTGAAATCAGGGTAGTTGCTGCCCGAAAAATAAAGGAAGCTGCTAGAGCAGCAGAAGCCTCTGCCCTTGCAGAGATCAAAGCTTTATCTCATAATGATAATTCACCTGGAGAGTGTATGCAAAAGCATGATGGAATTACCCTTTCCTTCAAAGAGTATGCTGCACTAACCTGCAAGGCGCACGAGGCCGAGGAACATTCTAAGAACAGAGTTGGAGATGCTATGCTTCTAGTAGATGAAGCCAATGTATCAAGAAAGGACATTTTGAAGAAGGTAGAGGAAGCCACAGAAGAAGTTAAAACCAGCAAGAAGGCCCTTGAGGAAGCTCTAGAAAGGGTAGAGGCTGCAAATCTAGGAAAGTTAGCAGTTGAAGAGGCGTTAAGGAAGTGGCGGTCAGATAATCACAAAAGACGATCCTCCATACATAACTCCACCAAGTTTAAAAATGCTTACCCTTCTCTCCATCGGAAGGATTCTCAGTTGCTCGATGTCAATGGGTTGAATCTGGTTAATGATGAGGCCAAGCAAGTTCTAAAGCCAACACTGTCTATAGGACAAATACTGAATAGAAAGTTGATGATGCCAGAAGAGTATGAAGCCGGAACTATGCTTGGAGAAAGAATCTCGGTGAAACGGAAGGTTTCTCTTGGTCAGATGCTAGGCAGACAAAACGCAGATGCATCCTTTGACAGGCAGGCTGAGAAGGAAAATGGTCAGAAGCCATTTTCTGCAAAGAGAAAGAAATTTGGATTTGGTCGATTCTCCCTTCTTTTGACAAAACAACAAAAGAAGAAGAAGCCAACACTGAACTTGAGGTGA 1665 0.4348 MEVSDTAANRPGSGFRAEIDTSAPFESVREAVSRFGGVGYWKPIINGLSNKHFAPELHHTEELDPGKLEEQAAVLEKELILKERETLEVLKELESTKRLVENMKSKLQKEEEAKLNFQMSVCNDMSLVNDDEKEDKENQVIVQDLKEGCIPCPSSAPGLILMELKQAKLNLNRTTSDIADVRASVESLNKKLGKERLSLGKTRERLTQNSSKICCLEEELNQTKLKLLVAKDACLDNPSDITKELQRLSSEAEHFKKMGEAAKSEVSEAMSKIEQTKAMIKTAEIRVVAARKIKEAARAAEASALAEIKALSHNDNSPGECMQKHDGITLSFKEYAALTCKAHEAEEHSKNRVGDAMLLVDEANVSRKDILKKVEEATEEVKTSKKALEEALERVEAANLGKLAVEEALRKWRSDNHKRRSSIHNSTKFKNAYPSLHRKDSQLLDVNGLNLVNDEAKQVLKPTLSIGQILNRKLMMPEEYEAGTMLGERISVKRKVSLGQMLGRQNADASFDRQAEKENGQKPFSAKRKKFGFGRFSLLLTKQQKKKKPTLNLR 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01116 554 Coils Coil 266 286 - -
Phco1g01116 554 Coils Coil 90 113 - -
Phco1g01116 554 MobiDBLite consensus disorder prediction 507 529 - -
Phco1g01116 554 Coils Coil 360 398 - -
Phco1g01116 554 MobiDBLite consensus disorder prediction 510 525 - -
Phco1g01116 554 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 17 115 - -
Phco1g01116 554 Coils Coil 171 191 - -
Phco1g01116 554 Gene3D - 160 315 - -
Phco1g01116 554 Pfam Weak chloroplast movement under blue light 17 113 IPR008545 -
Phco1g01116 554 Pfam Weak chloroplast movement under blue light 162 419 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01116 Phco-Chr1 13520413 13523064 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02340 3 49984789 49987789 Phco1g01116 1 13520413 13523064 PCT