Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01004 ATGCAGTTCAGGCTAGGCAAGCGCGTTATCCGTGTCGCTACATGGGTCTTCCGTCGGGTCAGAATCCGACCCAACAGGTATTACCGCCTCGGATCCACCTCTCCTTCGCACACTCGTAATTATAATCCCATCACGAAGCTTCTCACGTGGGGGACAAAGTTGAAGAGAGGAGCCAAGTCTCTCTGCAAGAAATCCGGGTCGGGTCCCGTTTGTGATAGTGCTCCGGCGGTGCCGAAAGGGCAATTGGCGGTTTACGTGGCGGAGGATGACGGCGAGTGTCGCCGGGTTTTGGTGCCGGTGATTTACTTCAACCACCCTCTGTTCAGCGGGTTGTTAAGGGAGGCGGAGAAGGAATTCGGGTTCGAGCACCCCGGTGGGATCACCATTCCGTGCCGACTCACCGAGTTTGAACGGGTCAAAACCCGGATCGCGTCCGGGTCGGGTTTACGCGGGAGAACCCGGAGATTGGGGCGGCGGCTATCTTGA 486 0.5782 MQFRLGKRVIRVATWVFRRVRIRPNRYYRLGSTSPSHTRNYNPITKLLTWGTKLKRGAKSLCKKSGSGPVCDSAPAVPKGQLAVYVAEDDGECRRVLVPVIYFNHPLFSGLLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGLRGRTRRLGRRLS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01004 161 Pfam Auxin responsive protein 65 140 IPR003676 GO:0009733
Phco1g01004 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 62 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01004 Phco-Chr1 10355916 10356401 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01004 1 10355916 10356401 Phco1g01004 1 10355916 10356401 ECH