Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00947 ATGTCGTTTTCCGATTCCGAATACGGCGGAACATCGGACTACAAGCCGTTCCGCCAAATCAGCCGCGACCGGTTATTATTTGAAATGCTTAGATCGGCAAGGTCACCCGACTCGAAGGCATGGAAGGTGCTCATAATGGATAAAGTCACTGTGAAAGTTATGTCACATTCGTGTAAAATGGCAGATATTACAGACCAAGAAATTTCCTTGGTGGAAGACCTCTTTCGGAGAAGGCAACCGTTACCATCTTTGGATGCTGTTTATTTCATGCAACCTTCTAAAGAGAATGTGGTCATGTTCCTGTCTGATATGTCTGGAAGGGAGCCCCTGTATAAGAAAGCCTATATATTTTTCAGTTCACCAATCCCAAAGGAACTTGTAAACCACATCAAGTGTGATACAAGTGTCTTACCCCGCATAGGAGCATTGAGAGAGATGAATTTGGAATATTTTCCAGTAGACAGCCAGGGGTTTACTACAGATCAAGAAACAGCAATGGACGATCTTTATGGCAACATTGAGAATACTCGCAGATTTAACAACTGCTTGAATAGTATGGCTATTCGAATAGCTACAGTTTTTGCTTCATTAAAGGAGTTACCATGTGTGTGGTATCGTGCTGCAAAGGAAAGTGGCGAGTCTACTGGAACAGCAGTTCGAGAATTAGTTCCTACCTACCTTGCTAGGGCTGTTTGGGACATGGTTTCTAAATATAAATCTACCATTCCCGGTTTTCCACAAAATGAAACTTGTGATCTTCTCATTGTTGACAGATCCGTAGATCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGAATATGAATGGAGATAAATATATGCATGAGGTTCCCAGCAAAACCGGGGGTGAACCTGAGATGAAGGAGGTCCTTCTACAAGATCATGATCCAGTCTGGCTTGAACTTCGCCACGCTCATATAGCAGATGCTAGTGAAAGACTGCATGAAAAGTTTACCAATTTCGTATCAAAGAACAAAGCAGCACAAATTCAACAAAGGGGAAGAGATGGTAGCGAATTATCTACACGAGATTTGCAAAAAATGGTTCAGGCATTGCCACAATACACTGAGCAGGTGGAAAAGATTTCACTCCATGTGGAGATAGCTGGAAAGATCAACACAATTATCAGAGAAACAGACCTTAGAGAGCTTGGCCAGTTGGAACAAGATCTTGTTTTTGGGGATGCAGGAGCGAAGGAAGTTATTAACTTTTTAAGAACAAAGCAGAGTACAACTCCTGAATATAAGTTGCGTTTGTTGATGATTTATGCAATTGTCTATCCTGAAAAGTTTGAGGGTGATAAAGCTTCAAAGCTAATGCAGTTGGCAAAACTATCACCTGATGACATGAAAGTTATCAGTAACATGCAACTGCTGGCGGGATCATCAAACAAGAAATCATCTACTGGTGGAGAAGGCGGTTTCTCACTCAAGTTCAGTAACCAGAAGACAAAGCATGCAGCTCGCAAAGATCGATCTGATGAAGAGGAAGAAACGTGGCAACTATTTCGATTTTTTCCCATGATAGAGGAGCTCATCGAAAATCTCAATAAGAATAAATTGCCCAAGAATGAATATTCGTGTCAAAATGAGCCAAGTCAGAGTAGTGCCCCAGGGGGGGGTTCAGCAAAAGACAGCCAAAAGCCAATAGCAGCCCCTACAACTTCTCTTCCTTCAAATAGATCTAGGAGGACAGCAAACTGGGGAAGATCTCGTACTACTTCAGATGATGGATATTCAAGTGACTCCACGTTGAAGAATTGGACTACTGATCCCAAGAGGATGGGAAAGCGAATCTTTGTGTTTATTATTGGCGGGGCTACTCGATCCGAGCTGCGAGTTTGTCACAAGTTGACAACAAAATTAAAAAGGGAAGTAATCCTAGGTACTACATCCATGGATGATCCTCCACAATATCTTACGAAATTAAAGTTATTGGGCGACAATGTTGCACCACCCATGGATGGCCTCGGCATATAA 2022 0.4209 MSFSDSEYGGTSDYKPFRQISRDRLLFEMLRSARSPDSKAWKVLIMDKVTVKVMSHSCKMADITDQEISLVEDLFRRRQPLPSLDAVYFMQPSKENVVMFLSDMSGREPLYKKAYIFFSSPIPKELVNHIKCDTSVLPRIGALREMNLEYFPVDSQGFTTDQETAMDDLYGNIENTRRFNNCLNSMAIRIATVFASLKELPCVWYRAAKESGESTGTAVRELVPTYLARAVWDMVSKYKSTIPGFPQNETCDLLIVDRSVDQIAPVIHEWTYDAMCHDLLNMNGDKYMHEVPSKTGGEPEMKEVLLQDHDPVWLELRHAHIADASERLHEKFTNFVSKNKAAQIQQRGRDGSELSTRDLQKMVQALPQYTEQVEKISLHVEIAGKINTIIRETDLRELGQLEQDLVFGDAGAKEVINFLRTKQSTTPEYKLRLLMIYAIVYPEKFEGDKASKLMQLAKLSPDDMKVISNMQLLAGSSNKKSSTGGEGGFSLKFSNQKTKHAARKDRSDEEEETWQLFRFFPMIEELIENLNKNKLPKNEYSCQNEPSQSSAPGGGSAKDSQKPIAAPTTSLPSNRSRRTANWGRSRTTSDDGYSSDSTLKNWTTDPKRMGKRIFVFIIGGATRSELRVCHKLTTKLKREVILGTTSMDDPPQYLTKLKLLGDNVAPPMDGLGI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00947 673 Gene3D - 394 518 - -
Phco1g00947 673 MobiDBLite consensus disorder prediction 538 602 - -
Phco1g00947 673 Gene3D - 150 273 IPR027482 -
Phco1g00947 673 MobiDBLite consensus disorder prediction 476 508 - -
Phco1g00947 673 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 274 390 IPR043127 -
Phco1g00947 673 SUPERFAMILY Sec1/munc18-like (SM) proteins 17 663 IPR036045 -
Phco1g00947 673 PIRSF VPS45_Sec1 12 665 IPR001619 GO:0016192
Phco1g00947 673 MobiDBLite consensus disorder prediction 476 496 - -
Phco1g00947 673 Pfam Sec1 family 42 654 IPR001619 GO:0016192
Phco1g00947 673 Gene3D - 519 663 IPR027482 -
Phco1g00947 673 Gene3D - 11 145 IPR043154 -
Phco1g00947 673 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 28 657 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00947 Phco-Chr1 9636442 9656127 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00947 1 9636442 9656127 Phco1g00947 1 9636442 9656127 ECH