Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00906 ATGGCAGAAGATGAGATGAAAGGCCTTCCCAAAGTGCTGGTTCTGGGTCCTCCATTGTGCTTCCCATCAATTCAATCTCTCTACTCTCACAAATTCCATTTTCTCAAACCTCACCTCTCAGATCTCTCACTTCAAGACTTCCTTCACCACCACCGTCCTCCCTCCATTACCGCCATTCTCTGCGGCGCTAACTACTCCATCACCGCCGAAGTCCTCCACCTCCTCCCGTCGCTCCGCCTCCTCGTCACCTGCAGCGCCGGAACAAATCATGTCGACCTCCGTGAATGTCGCCGCCGCGGAATCCAGGTCGCCAGCGCCGGACCGCTGTTCTCGGAGGATGTGGCGGATACAGCCGTGGCTCTGCTCATTGACGGAATGAGGAAAATCTCGGCGGCGGATCGGTGGTTAAGGACGCAGAATCTCCACAATACGCCCTGGGATTTATTCCCATTTGGGTCCAAGTTATCAGGGAAGCAAGTTGGGATTGTTGGATTGGGAAGCATTGGCATGGAAGTGGCGAAGAGGCTGGAGTGTTTTGGTTGCATAATCTCATACAACTCTAAGCATAAAAAAACTAGAGTTTCATATCCTTTCTATTCCAGTGTTATTGAGCTTGCAACTACTTGTGACGTTCTTGTGCTCTGTTGTGAACTGAATGAGCAAACAAAACACATAATTAACAGGGAAGTGATTTTGGCCTTAGGAAAAGGAGGATTTATTGTGAATATTGGAAGAGGGGGTCTTATTGATGAAAAGGAATTGGTAAAGTGTTTGATGGAAGGTGAAATTGGAGGTGCTGGTTTGGATGTGTTTGAGAACGAGCCTCATGTTCCCCAAGAGCTCTTTGAAATGAATAATGTGGTTTTGTCTCCTCATTCTGCTGCCATTACTAAGGAATCTTTCGTGAATATTTGTGAACTTGCTGGAGGGAATTTAGAAGCCTTTTTCTCAAATAAGCCCCTAATTACTCCAGTTATGTTGCCTGAATAA 990 0.4697 MAEDEMKGLPKVLVLGPPLCFPSIQSLYSHKFHFLKPHLSDLSLQDFLHHHRPPSITAILCGANYSITAEVLHLLPSLRLLVTCSAGTNHVDLRECRRRGIQVASAGPLFSEDVADTAVALLIDGMRKISAADRWLRTQNLHNTPWDLFPFGSKLSGKQVGIVGLGSIGMEVAKRLECFGCIISYNSKHKKTRVSYPFYSSVIELATTCDVLVLCCELNEQTKHIINREVILALGKGGFIVNIGRGGLIDEKELVKCLMEGEIGGAGLDVFENEPHVPQELFEMNNVVLSPHSAAITKESFVNICELAGGNLEAFFSNKPLITPVMLPE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00906 329 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 325 IPR006139 GO:0016616|GO:0051287
Phco1g00906 329 Gene3D - 44 320 - -
Phco1g00906 329 CDD HPPR 10 317 - -
Phco1g00906 329 Gene3D - 111 297 - -
Phco1g00906 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 295 IPR036291 -
Phco1g00906 329 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 10 140 - -
Phco1g00906 329 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 IPR006140 GO:0051287
Phco1g00906 329 FunFam Putative 2-hydroxyacid dehydrogenase 111 297 - -
Phco1g00906 329 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 9 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00906 Phco-Chr1 8981982 8987232 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00906 1 8981982 8987232 Phco1g00906 1 8981982 8987232 ECH