Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00905 ATGATTCTCCACTGCACATTGTGGAGTTGTGATATCAAAGTCAAAACTCAACGACTCTACTTCTCTCGCAAACTTTCTCCGATTATCTTTCCTGGAGCTGAATCATCAATGGCAATGGGAGACCAGCACAACCACAAAGATAAAAAGGAGCTTCAACCACTCCTTGTGTTTGGTCCTCCAACCATCTTCCCTACTTTTGAAGCTCAAAACTCTCACAACTACCGTTTCATCAAAGCTTTCTCCTCACAATTCCCTCTCCACCAATTCCTTACCGAGCAAAAGGTTGACCCGTCATCTATTCAAGCCATATTGTGCAACCCTATACAGAAGATCTCAGCAGATGCCATCCGCCTCCTCCCATCACTCCGCATTATTGTCACCAGCAGCGCTGGAACCGATCACATAGACTTGGTTGAGTGCAGCCGTCATAGTATTCAGGTTGTCTCTGCTGCTGCAGATCATGCCGCGGATGTTGCTGAAATGGCTGTGGGGTTGTTGCTTGATGTAATGGGCAAAATTTCTGCCGCTGATCGATATGTTCGGAAATGGGGTCCTTCTATGCCCTTGAATCTTTCTTCTGGTTCCAAGCTAAAAGGCAAGCGAGTAGGGATTGTTGGATTGGGAAAAATTGGCACAGCAGTTGCTAAAAGACTTGAGGCCTTTGATTGCAGAATTATGTACAATTCAAGAAACCAGAAGTCATTTGTCTCGTACCCCTTTTATTCTAATGTTGTTGAACTTGCAGGTAATAGTGATGTTCTTGTGCTTTGTTGCCCATTAAATGAACAAACAAGGCACATAATCAACAGAGAAGTGATGTTGGCATTGGGGAAAGATGGATTCATTGTCAATGTTGGCCGTGGAGCTCTAATCGACGAAAAGGAATTGGTGCAATGTTTGATGGAAGGGGACATAGGGGGTGCTGGCTTGGATGTGTTTGAGAACGAGCCTATTGTTCCTAATGAGCTCTTTGCAATGGATAATGTGGTCCTCTCCCCACATGCTTCTTCATTTACTTCAGATGGTTTCACTGAATCATGCAAACTTGCAGCAGAAGCTCTACAAGTTTTCTTTTCAAGTAACTGA 1086 0.4411 MILHCTLWSCDIKVKTQRLYFSRKLSPIIFPGAESSMAMGDQHNHKDKKELQPLLVFGPPTIFPTFEAQNSHNYRFIKAFSSQFPLHQFLTEQKVDPSSIQAILCNPIQKISADAIRLLPSLRIIVTSSAGTDHIDLVECSRHSIQVVSAAADHAADVAEMAVGLLLDVMGKISAADRYVRKWGPSMPLNLSSGSKLKGKRVGIVGLGKIGTAVAKRLEAFDCRIMYNSRNQKSFVSYPFYSNVVELAGNSDVLVLCCPLNEQTRHIINREVMLALGKDGFIVNVGRGALIDEKELVQCLMEGDIGGAGLDVFENEPIVPNELFAMDNVVLSPHASSFTSDGFTESCKLAAEALQVFFSSN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00905 361 CDD HPPR 52 359 - -
Phco1g00905 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 337 IPR036291 -
Phco1g00905 361 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 164 335 IPR006140 GO:0051287
Phco1g00905 361 FunFam Putative 2-hydroxyacid dehydrogenase 155 339 - -
Phco1g00905 361 Gene3D - 83 359 - -
Phco1g00905 361 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 59 359 - -
Phco1g00905 361 Gene3D - 155 339 - -
Phco1g00905 361 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 87 163 IPR006139 GO:0016616|GO:0051287
Phco1g00905 361 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 99 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00905 Phco-Chr1 8971862 8974259 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00905 1 8971862 8974259 Phco1g00905 1 8971862 8974259 ECH