Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00904 ATGTTGATCCCTCATCCATCAATGCTCCTTGCATCTCAAAACACCAACATGGAAGGACAACAACTCAACTTAGAGGGTCCTTCTCCAAATCAGTCAAACATACCCTCTGAGTTCGTCTGGCCTGATAATGAGAAACCATGCCTTGAACCACCAAAACTCAAAATTCCACCCATTGACATGAAGGGGTTTCTCTCAGGAGACCCAGAAACTGTGTCAGCAATTTGTGCAGAAGTGAACGAGGCATGCAGGAAGCATGGCTTCTTTCTTGTTGTCAACCATGGTGTTGACAAGAAGCTCATAGATCAAGCTCATAAGCTCATAGACACTTTCTTCTGCATGGAACTGCCAGAGAAGCAGAAGCTTCAGAGAAAACTTGGAGAACATTGTGGCTATGCTAATAGCTTTATTGGAAGGTTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTACTCCCCGGATAACAAAACTGTTGAGGACTATTTCCTAAATTCTATGGGGGAAGAGTTCAGGCATTTTGGGAGTCTGTTTCAAGAATACTGTGAAGTGATGAGCAATCTGTCTCTTGAGATCATGGAGCTGCTGGGAATGAGCCTAGGAGTGGGCAGGGAATGTTTCAGAGATTTCTTCGAAAAAAATGAGTCTGTTATGAGGTTGAATTACTACCCACCATGCCAAAAACCTGAGTTAGCTTTAGGAACTGGGCCTCATTGTGACCCCACTTCCCTAACCGTTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTGTTTGTCGATGGAAGATGGTGCTCTGTCGCCCCAAAAGAAGATGCTTTCGTTGTCAACATTGGCGACACATTTATGGCTCTTTCCAATGGGATATTCAAGAGTTGCTTGCATAGAGCAGTTGTGAACAACAAAATTGTGAGAAAATCTCTTGCTTTCTTCCTATGTCCAAATAAAGACAAAGTGGTTACTCCTCCAAAGGATCTAATTACCATGGAGAATCCAAAGAAATATCCAGATTTCACATGGCCAAGTCTTCTTGAGTTCACACAGTTACATTACAGGTCTGACCCTGAAACACTTGATGCCTTCGCCAAGTGGTTACTAGAGAAGAACAAGTGA 1113 0.4349 MLIPHPSMLLASQNTNMEGQQLNLEGPSPNQSNIPSEFVWPDNEKPCLEPPKLKIPPIDMKGFLSGDPETVSAICAEVNEACRKHGFFLVVNHGVDKKLIDQAHKLIDTFFCMELPEKQKLQRKLGEHCGYANSFIGRFSSKLPWKETLSFHYSPDNKTVEDYFLNSMGEEFRHFGSLFQEYCEVMSNLSLEIMELLGMSLGVGRECFRDFFEKNESVMRLNYYPPCQKPELALGTGPHCDPTSLTVLHQDQVEGLQVFVDGRWCSVAPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNNKIVRKSLAFFLCPNKDKVVTPPKDLITMENPKKYPDFTWPSLLEFTQLHYRSDPETLDAFAKWLLEKNK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00904 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 314 IPR005123 -
Phco1g00904 370 Pfam 2OG-Fe(II) oxygenase superfamily 216 314 IPR044861 -
Phco1g00904 370 PRINTS Isopenicillin N synthase signature 78 95 - -
Phco1g00904 370 PRINTS Isopenicillin N synthase signature 274 300 - -
Phco1g00904 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 158 IPR026992 -
Phco1g00904 370 SUPERFAMILY Clavaminate synthase-like 30 353 - -
Phco1g00904 370 FunFam Gibberellin 20 oxidase 2 28 352 - -
Phco1g00904 370 Gene3D - 27 349 IPR027443 -
Phco1g00904 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 55 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00904 Phco-Chr1 8961568 8963314 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00904 1 8961568 8963314 Phco1g00904 1 8961568 8963314 ECH