Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00894 ATGGCGGATGCTGATCTCACCTCCCCGCTCCTCGCCTCCGATCACATCGTACTCACTGTGCACTCCTCCGCCGCTCCCTCCGCCGATGGCAACCCCTACCGCGCGCTCGGATGCGAGGACGAGCTCGTCGTGCCGCCTCCCGCAACCCTGGACCCCTTCCGCAACGGCACACCGGTGGTTGAGGGGCTCTACGAGTGGGTGAAGACGGTCCTTTGTCTGCCGGTGGCGCTGCTGCGGCTCGCGCTGTTCGGGATGTGCCTCGCCGTGGGGTACGTGGCGACGAAGGTGGCACTGGAAGGGTGGAAGGACAAGGAGAATCCCATGCCGAAGTGGAGGTGTAGGGTTATGTGGATCACAAGAATGTGCGCCAGATGCATTCTTTTTTCGTTTGGCTATCAGTGGATAAAACGGAAAGGAAAACCTGCACCAAGGGAAATTGCTCCTATAATTGTATCCAATCATGTATCATACATTGAACCTATCTTCTATTTCTACGAATTATTTCCCACTATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATTATAAGAGCAATGCAGGTCATATATGTTAATAGATTCTTACCATCGTCAAGGAGGCAGACTATCAGGGATATAAAGAGAAGGGCCTCTTGTGATAAATTTCCTCGAGTACTGTTATTTCCTGAGGGAACGACAACTAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCAGGATACCCAATCCAGCCTGTGATTGTACGCTATCCTCATGTGCACTTTGACCAATCCTGGGGTAATGTTTCTTTGGGAAAGCTTATGTTCAGGATGTTCACTCAATTTCACAACTTCTTTGAGATAGAATATCTTCCAGTTGTTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTCGGGAGAGGACTAGCCGTGCTCTTGCAACTGCATTGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTAATTTGAAAGCACAAGAAGCAAAACAGGAGAACCCCTCTAGTTATATGGTTGAAATGACTAAGTTGGAAGAAACATTTCATGTCAGCAGCATGGAAGCTGTGGACTTTCTGGATAAATTCTTGGCCATGAATCCTGATCCCAGTGGTCGTGTCCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCCCGCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGTGTGGGACAATTACTTTCAGACAGTTCTTGTATGGATCTGCCCGTATCATGTCGCAGCCAGGGTTCCATCAAGCCTGTGAAGAAGCCTTTGCTGGGTGTGGTGGTGCAGTAAAGCCCTATATTGTGGAACAGGAGTTACGAGATTTCATCCAACCTGTTATCAACAGCTGGAATGCGGATGAGGTCCATGAGTTTTTTATGTTATTTGATAATGATTATGATGGAAGGATTGCCAAGAATGATTTTGTTTTATGCCTTCGAAGAAATCCTCTTCTCATAGCATTTTTTACACCTCAACCAAAGCAAAAGGAATTCGAAGGTAATGGGGTGATAGAGATAGTGTGA 1578 0.4651 MADADLTSPLLASDHIVLTVHSSAAPSADGNPYRALGCEDELVVPPPATLDPFRNGTPVVEGLYEWVKTVLCLPVALLRLALFGMCLAVGYVATKVALEGWKDKENPMPKWRCRVMWITRMCARCILFSFGYQWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFLPSSRRQTIRDIKRRASCDKFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSLGKLMFRMFTQFHNFFEIEYLPVVYPLDDKETAVHFRERTSRALATALNAVQTGHSYGDIMLNLKAQEAKQENPSSYMVEMTKLEETFHVSSMEAVDFLDKFLAMNPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKCGTITFRQFLYGSARIMSQPGFHQACEEAFAGCGGAVKPYIVEQELRDFIQPVINSWNADEVHEFFMLFDNDYDGRIAKNDFVLCLRRNPLLIAFFTPQPKQKEFEGNGVIEIV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00894 525 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 123 305 - -
Phco1g00894 525 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Phco1g00894 525 SUPERFAMILY EF-hand 352 509 IPR011992 -
Phco1g00894 525 Gene3D - 348 502 - -
Phco1g00894 525 CDD LPLAT_LPCAT1-like 123 331 IPR045252 GO:0008374
Phco1g00894 525 Pfam Acyltransferase 145 252 IPR002123 GO:0016746
Phco1g00894 525 SMART plsc_2 148 258 IPR002123 GO:0016746
Phco1g00894 525 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 43 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00894 Phco-Chr1 8756314 8765422 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00894 1 8756314 8765422 Phco1g00894 1 8756314 8765422 ECH