Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00886 ATGAGTTTTATGACAATGTACTCCCCCTCAGATTTGGATCAAGAGGACCCTACTGGGATTTCTACTCAATCTGATGACTTGGTGAATAATAGAGCATACAAATTGTCCCAAATCAGAACAAAGTGTATCTACCAATTCTGCTCCTGCATGGGAGTTTGTTTAGATATTTGGGTTCGTCAAGCCAAACACCTTCCAAACATGGACATGTTCCACAAGACTTTGGGAGATGTGTTTGGGAGGTTGCGTGTAAATGTCAACAAGGTGGATGGAACACTGAACAAATATACACGGGAAAAGATACAAGGGACCTGCCCTATTCTGAATAGCAGTGGGAAGCCTTGTAAGCCAGTTGTTGTCTTGAGGTTATCCATTCAGTACATTCCAATTGAGAAACTTATCACTTATCATCAAGGAGTTGGAGCTGGTCCCAATTATTTTGGGGTTCTTGGCACATATTTTCCATTGAGGGAAGGTGGAACGGATGGTGTAATGGCAACTCATGATGAGGAAACTAGAAGATTTTTCAAGAACTCTTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGCTGGAAAACAACAGAGCTGGGCCAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATGGCAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGCGATGGGCGATATGATGATCCCCACCATCCTCTCTTTAGGTCACTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGCTGTCCACGGGAGCCATGGCATGACTTACATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACCAACTTTGAGGAGCGCTGGTTAAGAGCTTCGAAACCTAAAGGGATTAAAAAATTTACAAGTTCATATGATGATGCATTGCTTAAGCTAGACAGAATAAAAAATATTATCAGTTCAACTGATTATCTTAATCTTAATGAGGATAATCCTGCATCATGGCATGTTCAGATATTCCGTTCAATTGATTCAAATTCTGTCAAGGGATTTCCGAAGGAGCCAAGAGATGCATCAAGTGTGAATCTAGTATGTGGGAAGAATGTTCTGATTGACATGAGTATACATACAGCATATATAAAGGCCATTCGCGCTGCACAACATTACATTTATATTGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTCAATATAAAGATATTGGAGCTAATAATTTAATTCCAATGGAAATTGCACTCAAGATTGCTGCAAAGATAAGGGCAAATGAGAGATTTGCAGTGTACATTGTTATTCCAATGTGGCCGGAGGGTGTTCCAACAGGTGCTGCCAATCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGGGACAATTTACAAGGCTTTGGTTGAGGTTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTTGGCAATCGTGAGGCAATAGATATGTATGAGAATGTCAGTACGTCTAGAACTCCTCGGCCAGCGAATAGTCCACAAGAAAATAGTAGAAACAATCGACGATTCATGATTTATGTTCATTCAAAAGGTATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAGGGAACGAGGGACACCGAGATTGCAATGGGAGCCTACCAACCTCATCATACCTGGGCAAGATTGTCGGCTTATCCCCGTGGGCAGATCTATGGGTATAGGATGTCACTTTGGGCTGAACATACGGGTACTATTGAAGGCTGCTTCTTACAACCAGAGAGCCTTGAATGTGTTAGAAGGATTAGAACAATAGGTGAAGAGAACTGGAAACAATTTTCAGCTAGTGATGTAACAGAGATGAGAGGGCATCTTCTGAAGTACCCGGTAGAAGTTGATGAAAAGGGTAATGTAAGATCCCTTCCTGGCCATGAAGAGTTCCCAGACGTGGGAGGAAAGATAGTTGGATCGCTTTTAACTATTTGA 2061 0.4105 MSFMTMYSPSDLDQEDPTGISTQSDDLVNNRAYKLSQIRTKCIYQFCSCMGVCLDIWVRQAKHLPNMDMFHKTLGDVFGRLRVNVNKVDGTLNKYTREKIQGTCPILNSSGKPCKPVVVLRLSIQYIPIEKLITYHQGVGAGPNYFGVLGTYFPLREGGTDGVMATHDEETRRFFKNSSVQVLLCPRIAGKQQSWAKQKEVGTIYTHHQKTVIVDADAGNGKRKIVAFVGGLDLCDGRYDDPHHPLFRSLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRASKPKGIKKFTSSYDDALLKLDRIKNIISSTDYLNLNEDNPASWHVQIFRSIDSNSVKGFPKEPRDASSVNLVCGKNVLIDMSIHTAYIKAIRAAQHYIYIENQYFIGSSYNWSQYKDIGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAANQRILFWQHKTMQMMYGTIYKALVEVGLEAAFSPQDYLNFFCLGNREAIDMYENVSTSRTPRPANSPQENSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWARLSAYPRGQIYGYRMSLWAEHTGTIEGCFLQPESLECVRRIRTIGEENWKQFSASDVTEMRGHLLKYPVEVDEKGNVRSLPGHEEFPDVGGKIVGSLLTI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00886 686 Pfam PLD-like domain 389 574 IPR025202 -
Phco1g00886 686 SUPERFAMILY Phospholipase D/nuclease 160 303 - -
Phco1g00886 686 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 538 565 IPR001736 GO:0003824
Phco1g00886 686 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 203 238 IPR001736 GO:0003824
Phco1g00886 686 SMART pld_4 203 238 IPR001736 GO:0003824
Phco1g00886 686 SMART pld_4 538 565 IPR001736 GO:0003824
Phco1g00886 686 PANTHER PHOSPHOLIPASE D 161 683 IPR015679 -
Phco1g00886 686 Pfam Phospholipase D C terminal 613 682 IPR024632 -
Phco1g00886 686 Gene3D Endonuclease Chain A 349 590 - -
Phco1g00886 686 SUPERFAMILY Phospholipase D/nuclease 361 623 - -
Phco1g00886 686 FunFam Phospholipase D 351 584 - -
Phco1g00886 686 Gene3D Endonuclease Chain A 160 322 - -
Phco1g00886 686 MobiDBLite consensus disorder prediction 1 23 - -
Phco1g00886 686 Pfam Phospholipase D Active site motif 204 238 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00886 Phco-Chr1 8581569 8588781 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00886 1 8581569 8588781 Phco1g00886 1 8581569 8588781 ECH