Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00878 ATGGCTTCAGACCCCAGAAAGGGACTGGTTCTGAGTTCAAAGGCCATAGCTGATGCAGCTTCATGGTACTGTGCCTTTGTTCTTGTTGCCCTTTTGCTCCTAAGCATGTTCAGAGACAGCTCCATGCTTCCAACCCATGCCAACCTCGTAGACAACCAACTCCTGTTCCGGCCATGCGAGGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCACACAATAAGTGACAAGTGTGGTGACCCTTTTATAGTTGAGAACAACCCTCACATCCATGACCCTGATGATGTCTTCCCTGGCCTCGTTATCAAGATCACACCCTCATATCATGCCTAG 333 0.4835 MASDPRKGLVLSSKAIADAASWYCAFVLVALLLLSMFRDSSMLPTHANLVDNQLLFRPCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITPSYHA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00878 110 Pfam LysM domain 63 105 IPR018392 -
Phco1g00878 110 CDD LysM 62 104 IPR018392 -
Phco1g00878 110 PANTHER EMBRYO SAC 1 13 109 - -
Phco1g00878 110 Gene3D LysM domain 53 110 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00878 Phco-Chr1 8507469 8507801 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00878 1 8507469 8507801 Phco1g00878 1 8507469 8507801 ECH