Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00835 | ATGGGGAGTGAGAAAGGAGAAAGCTTGTGTGCGTCGCCATGGCTGAAAATCTCGAAGGAGGTGGACGCCGCAGCTGCTTCCGAGACCTTGCGCTTCGTTGAACGTATGGGGGCTGCCACCGCCGTTCCGCCAAAGTGGTCCGCGCGTGGCATCTACGACCCCTTCTTTCGGAACTTCATCAAAGTCAATCACATCCAACCTGGACGAATTTCCATCTCCATTTTCGCCAAACCTCCCATTTGTAATGGTTTTGGAACTCTGCATGGAGGTTCTGTTGGGACTTTGGCTCATATTCTGTCAACTGCTTGTGCTAGAACGATAGTTGCTGAGGACAAGGAACTTTTTCTCGGGGAAATTAGCATTTCTTACATGTCTGCCACTCCAGCAAACGAAGAAGTGTTAGCCAATGCCTCTGTAGTGAAGTCTGGCAGAAATTTGACTGTAGTCGCAGTTGAGTTTAAATTGAAGAAATCTGGGAATATGGCCTATAGTGCTCGTGCTACCTTCTATAACATGCCACTTTCCAGTTTATGA | 534 | 0.4813 | MGSEKGESLCASPWLKISKEVDAAAASETLRFVERMGAATAVPPKWSARGIYDPFFRNFIKVNHIQPGRISISIFAKPPICNGFGTLHGGSVGTLAHILSTACARTIVAEDKELFLGEISISYMSATPANEEVLANASVVKSGRNLTVVAVEFKLKKSGNMAYSARATFYNMPLSSL | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00835 | 177 | Gene3D | Hotdog Thioesterase | 44 | 173 | - | - | |
| Phco1g00835 | 177 | NCBIfam | hotdog fold thioesterase | 60 | 156 | IPR003736 | - | |
| Phco1g00835 | 177 | CDD | PaaI_thioesterase | 60 | 170 | - | - | |
| Phco1g00835 | 177 | Pfam | Thioesterase superfamily | 84 | 158 | IPR006683 | - | |
| Phco1g00835 | 177 | PANTHER | THIOESTERASE SUPERFAMILY MEMBER-RELATED | 24 | 174 | IPR039298 | GO:0047617 | |
| Phco1g00835 | 177 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 54 | 170 | IPR029069 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco1g00835 | Phco-Chr1 | 7717457 | 7720049 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco1g00835 | 1 | 7717457 | 7720049 | Phco1g00835 | 1 | 7717457 | 7720049 | ECH |