Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00834 | ATGCCTCGTGGAACGCTTGAAGTTATTTTGATCAGCGCCAAAGGCATCGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGACACAGGAGCACAAGAGCACTGTGCAAGAAGATTCTGGATCCAAACCTCAATGGAATGAGAGCTTTCTTTTCACTGTCTCTGACAGCACTTCTGAACTTAATCTAAAGATCATGGATAAAGACAACTTTACTCAAGATGATTTTCTTGGCGAGGCAACCATTGATTTAGGTCCACTGTTTGAAGCCGGTAGCCTTCCAGAAACTGTTCACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTGCTGAGAGAAACGAGGAGCAGGAATACAGTGTAGAGGATGAGAACTATGGTGGATGGAAAGAATCAAATGAGGAATTCTAA | 450 | 0.4244 | MPRGTLEVILISAKGIDDNDFLSSIDPYVILTYRTQEHKSTVQEDSGSKPQWNESFLFTVSDSTSELNLKIMDKDNFTQDDFLGEATIDLGPLFEAGSLPETVHKVVKDEEYCGEIKVALTFTAERNEEQEYSVEDENYGGWKESNEEF | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00834 | 149 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Phco1g00834 | 149 | PANTHER | C2 DOMAIN-CONTAINING | 1 | 138 | - | - | |
| Phco1g00834 | 149 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 124 | IPR035892 | - | |
| Phco1g00834 | 149 | SMART | C2_3c | 5 | 102 | IPR000008 | - | |
| Phco1g00834 | 149 | Pfam | C2 domain | 4 | 96 | IPR000008 | - | |
| Phco1g00834 | 149 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
| Phco1g00834 | 149 | Gene3D | C2 domain | 2 | 124 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco1g00834 | Phco-Chr1 | 7712299 | 7714553 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco1g00834 | 1 | 7712299 | 7714553 | Phco1g00834 | 1 | 7712299 | 7714553 | ECH |