Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00814 ATGGCAGAAGCAACAAAAGGGTATGCTGTTGTCACAGGAGCAAACAAGGGAATTGGATTTGCAATATGCAAGCAATTGGCTTCAAATGGGGTCACTGTGGTGCTCACAGCCAGAGATGAGAAGAGGGGTGTTGAAGCTGTTGAGAAACTCAAAGAGCTTGGTCACCCTGTGGTTTTTCATCAACTTGATGTTACAGATCCAAAAAGTATAACATCACTGGCAGATTTCATCAGGAACCAATACGGAAAACTGGATATCTTGGTAAACAATGCTGCAATTCCTGGGGCACATGTGAACGGTGAGGCTATGGCTGCTGCTGGCATTGTGGAAAATGTTGGTCGTGTTGATTGGAGTAAAATAGTAACTGAAACCTATGAATTAGCTGAAGCAGGTCTTAAAACAAACTACTACGGAGTCAAGGAATTAACCAAAGCACTTATTCCCCTTCTCCAGTTTTCAAGCTCCCCAAAAATTGTCAATGTTTCCTCATCCATGGGAAGGCTTGAGCATATGAGGAATGGATGGCCTAAAGAAGTGCTCAATGATGTTGAAAACCTTACAGAAGACAAGATTGATGACATTTTGGATGAATTTCTAAAGGACTTTAAAGAGGGTTCTCTAGATACCAAAGGCTGGTCTCTTGCTATGTCTGCATATGGTGTCTCAAAAGCTGCTCTTAATGCTTACACAAGGATTCTGGCCAAGAAGTATCCCTCATTCTGCATCAATGCTGTTTGTCCAGGCTATGTGAAAACAGATATAAACTACAATACAGGTTTTCTCACACCAGATGAAGGTGCTGAAGCTGCAGTGAGATTAGCACTGCTACCTGAGGGAAGCCCTTCTGGCCTCTTTTTCTCTAGAAGTGAAGAGAAACCATTTTGA 885 0.4237 MAEATKGYAVVTGANKGIGFAICKQLASNGVTVVLTARDEKRGVEAVEKLKELGHPVVFHQLDVTDPKSITSLADFIRNQYGKLDILVNNAAIPGAHVNGEAMAAAGIVENVGRVDWSKIVTETYELAEAGLKTNYYGVKELTKALIPLLQFSSSPKIVNVSSSMGRLEHMRNGWPKEVLNDVENLTEDKIDDILDEFLKDFKEGSLDTKGWSLAMSAYGVSKAALNAYTRILAKKYPSFCINAVCPGYVKTDINYNTGFLTPDEGAEAAVRLALLPEGSPSGLFFSRSEEKPF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00814 294 Pfam Enoyl-(Acyl carrier protein) reductase 216 258 - -
Phco1g00814 294 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Phco1g00814 294 PRINTS Glucose/ribitol dehydrogenase family signature 150 166 IPR002347 -
Phco1g00814 294 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Phco1g00814 294 PRINTS Glucose/ribitol dehydrogenase family signature 219 238 IPR002347 -
Phco1g00814 294 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Phco1g00814 294 Pfam short chain dehydrogenase 9 168 IPR002347 -
Phco1g00814 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 280 IPR036291 -
Phco1g00814 294 CDD carb_red_PTCR-like_SDR_c 8 294 IPR045313 GO:0016616
Phco1g00814 294 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 206 234 IPR020904 GO:0016491
Phco1g00814 294 FunFam (+)-neomenthol dehydrogenase 2 294 - -
Phco1g00814 294 Gene3D - 2 294 - -
Phco1g00814 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 238 IPR002347 -
Phco1g00814 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 IPR002347 -
Phco1g00814 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Phco1g00814 294 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00814 Phco-Chr1 7565127 7567093 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00814 1 7565127 7567093 Phco1g00814 1 7565127 7567093 ECH