Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00778 ATGGACAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTACCAACCTTCACCTTCTTCTGTGGATCAAAACGACCATTCAATCACTGAAACTGTTGGATACTCCACATTCAGTGGCGATTCCTTTGTGTATTGCCGGACTAACTCGGAGGTCTCAAACTTCTCTGAGCCTATTGATGACAATAGCTTTGCAGGTGAACATTCACCTTCTCTATGGACACCTGTGAAACATGGAGCTAGTCAGGCTGTTCTTTCAAGGTTAGGAATGAAGCAGCCCAGGCACTCAATGGATGATAAATCTGATGATCTTGATCTCTTGGAGTCAGAGCTTGATATGATGAGGGAAAGATTTTCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTCACAATATCAAATTCAATCACCAACCTCTATGCAACTGTTTTTGGGCAAAATTTAAAGTTGGAGCCTCTCAACCCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAGTATTTAGATGATGGTACAATTGTGGAGATGATGACAAGCAGACCAAGGTCAGATATTTATATTAACCTCCCTGCACTTCAAAAGCTCGACACCATGCTCATAGAAATATTGGATAGTTTCCAGGATACTGAATTTTGGTATGCAGACCAAGGGAGCTTATCAGATAACTCAACTCGGTCACGTGCAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTGCCAGTTCCTTGTGTTCACTCTGGGGGCCTCAATGATAAGTCAACAAAGCACTTGAATGAGAAAAGAGACTGCGCTAATCAAATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTTGCAGAGATGGACATCCCAGAAACATATCTGGCAAATCTTCCCAAGAGTGGAAGAACAAGTCTGGGGGACACAATTTACCGCTATATGTATTCTGCAGACAAGTTCTCACCAGATTACCTTCTTGATTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTGGCAGACAAGGTTGAGTCTTCAATGTTCACTTGGAGGAGAAAAGCTTGTCTAAGCCATTCAAAAACATCATGGAACAAAGTTAAGGATCTCATGGCTGACACTGACCGAAGTGACAAAAACTACACCTTAGCTGAGAGAGCTGAGACCTTGTTGTTCTGCTTGAAGCAAAGATATCCTGAGCTCTCACAAACATCCTTGGACACATGCAAGATTCAATATAACCGGGATGTAGGAAAAGCAATATTAGAGAGCTACTCAAGAGTACTAGAAGGCTTAGCATTTAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAATGAGGAACCAAAATGTATAG 1440 0.4174 MDNSSNFDENSDVGYQPSPSSVDQNDHSITETVGYSTFSGDSFVYCRTNSEVSNFSEPIDDNSFAGEHSPSLWTPVKHGASQAVLSRLGMKQPRHSMDDKSDDLDLLESELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLNPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFQDTEFWYADQGSLSDNSTRSRAGSFRRIVQRKDEKWWLPVPCVHSGGLNDKSTKHLNEKRDCANQIHKAAMAINSSVLAEMDIPETYLANLPKSGRTSLGDTIYRYMYSADKFSPDYLLDCLKISSEHEALELADKVESSMFTWRRKACLSHSKTSWNKVKDLMADTDRSDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSMRNQNV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00778 479 FunFam Rop guanine nucleotide exchange factor 14 346 479 - -
Phco1g00778 479 Coils Coil 97 117 - -
Phco1g00778 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 58 477 IPR038937 GO:0005085
Phco1g00778 479 MobiDBLite consensus disorder prediction 1 27 - -
Phco1g00778 479 ProSiteProfiles PRONE domain profile. 101 479 IPR005512 GO:0005085
Phco1g00778 479 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 475 IPR005512 GO:0005085
Phco1g00778 479 FunFam Rop guanine nucleotide exchange factor 2 313 437 - -
Phco1g00778 479 Gene3D PRONE domain, subdomain 1 104 344 - -
Phco1g00778 479 Gene3D PRONE domain, subdomain 1 345 479 - -
Phco1g00778 479 FunFam Rop guanine nucleotide exchange factor 14 103 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00778 Phco-Chr1 7200160 7202188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00778 1 7200160 7202188 Phco1g00778 1 7200160 7202188 ECH